| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4436 |
|---|
| Symbol | |
|---|
| ID | 4666310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4930855 |
|---|
| End bp | 4931853 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639825627 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_972750 |
|---|
| Protein GI | 120613072 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.785068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG TGCCCGCATC CACGGCATCC CCCGCGCCGC AGCCCGTGGC GGCGCGTTCC
CCTGAAACGC GCGGCCTGCT CTGGGGCCTG CTGGGCGTGG CGATCTTCGC GCTCACGCTG
CCGATGACGC GGCTGGCCGT GGGCACGCCG GAGGCGCCGC AGCTGCCCGG CGCCTTCGTC
GCCATCGCCC GCGCGGCCAT CGCGGGGCTG CTGTCCGTGG CGCTGCTGCT GGCGCAGCGC
GCGCCGCTGC CGGCCCGCGC GGACTGGCTT CCGCTCGCGG TCACGTCGCT GGGCGTGGTG
TTCGGCTTCC CGCTGCTGAC TTCGCTGGCC ATGCGCCACG TGGCGGCGGT GCATGCGAGC
GTGGTCATCG GGCTGCTGCC GCTGGCCACC GCGCTGGTGG GGGCGCTGCT GCACCGCCAG
CGGCCCTCCG CACGCTTCTG GCTCTGCGCG CTGGCGGGCA CCGCGCTGGT GGTGGCCTTC
GCCCTGCGGC GTCCGGAGGG CGGCGGGCTG GCGCTGCATC CGGCCGATCT GCTGCTGCTC
GCTGCCGTGC TCTGCGCGGC CGTGGGTTAC GGCATCGGCG GACGCCTGTC GCAACGCATG
CCGGCCGGCG CGGTGATCTG CTGGGCACTG GTGATGGGGC TGCCCGTGGC GCTGCCGGCG
GCCTGGTTCT TCGCGCCTTC GCCCGATGCC GCGGCGTCCG TGGCTCCAGC CGCCTGGGCG
GCCCTGGCGT ACGTATCGGT GTTTTCCATG TGGCTGGGCT TTTTCGCCTG GTACCGGGGC
CTGGCCCTGG GCGGCACCGT GCGGGTGAGC CAGATGCAAC TGGTGCAGCC GTTCCTGGGC
ATGCTGTTCG CCGTGCCGCT GCTCGGCGAA CGGCTGGATG CGGCGAGCCT GGGATTCGGG
CTCGCCGTCA TGGCCACGGT TCTCATCGGC CGCCGCGCGC CCGCCGGGCA GCGCGCCCCC
GCAGTGCCCG CCGCCCCGGG AGGACCGCCG CGCAGTTAA
|
|---|
| Protein sequence | MSTVPASTAS PAPQPVAARS PETRGLLWGL LGVAIFALTL PMTRLAVGTP EAPQLPGAFV
AIARAAIAGL LSVALLLAQR APLPARADWL PLAVTSLGVV FGFPLLTSLA MRHVAAVHAS
VVIGLLPLAT ALVGALLHRQ RPSARFWLCA LAGTALVVAF ALRRPEGGGL ALHPADLLLL
AAVLCAAVGY GIGGRLSQRM PAGAVICWAL VMGLPVALPA AWFFAPSPDA AASVAPAAWA
ALAYVSVFSM WLGFFAWYRG LALGGTVRVS QMQLVQPFLG MLFAVPLLGE RLDAASLGFG
LAVMATVLIG RRAPAGQRAP AVPAAPGGPP RS
|
|---|
| |