Gene Aave_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4430 
Symbol 
ID4665175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4922872 
End bp4924800 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content68% 
IMG OID639825621 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_972744 
Protein GI120613066 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.436802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGC TCAACGTCGG CGCGCGCGCC CTTCTCGCCA ACCAGGTGGC CCTGCAGACC 
ACCGGCCACA ACATCGCCAA CGTCAACACC GCGGGCTACT CGCGGCAGAC GCTGTCGCTG
CAGACGGTGC AGGGACAGTT CACCGGCGGC GGCTACATCG GCCAGGGCGT GGACGTGCAG
ACCATCCTGC GCAACCACAA CGAACTGCTC ACGCGGCAGG CGGCGGCCGC GGATTCGGTG
CAGGCGTCCG ACAAGACGCG CGCGGAGCGG CTGTCGCAGA TGCAGGACGT GTTCGGCGGC
GGCACCAGCG GGCTGGGCGC GGCCATCACC GACATGCTCA ACTCGTTCAA GGACGTGGTG
GCCTCGCCCA TGGACATGAC CGCGCGCACG GTGTCCATCA CCCGCATGGA CGAAACCGCC
GCGCGCATGC GCTCGTCGGC CGGGCGCCTG GACGAGATCC AGTACACCGT GAAGGAACAG
CTCACGGGCG ACGTGAACGC GCTCAACGCC CTGTCCAAGC AGATGGCGAG CGTGAACGAG
CAGATCGCGC GCGTGAAGGG CAACGGGCAG ACGCCCAACG ATCTGCTGGA CCAGCGCGAC
CAGATCATCC GCGAGATCAA CCGGTACGTG CAGACCACGC AGGTGGCGGC GGACGACGGC
ACCGTGGGCC TGTTCGTGGC GGGCAGCCAG CCGCTGGTGC TGGGCACCAC GGCCACGCCG
CTGCAGGTGC AGGAATCGAG CATGTTCCCG GGCAGCGGGC AGCTCAAGGT GTACTTCAGC
CCGCCCGGCA TCAAGCCCAT CGAACTGGAC GACGGCATGC TCGGAGGCGG TGAACTCTCC
GGCCTGCTGC GCTTCCACAA CAACGATCTG GCCGAGGGCC GCAACCTGCT GGGCCGCATG
GCGCAGGCCA TCGGCATGAC GATGAACGCG CAGCACAAGC TCGGCCTCAC GCTGGACGGG
GAAGCCGGCA AGGACCTGTT CACCGTGCCC GCCAGCATGC CGGGCTATAC GAACGGCACG
GCGGTCGGCA CCGTGGCGTT CACGGATGCG ACGAAATTCG CGGCTTCCGA TTACGAGGTG
CGTTTCACCA CGCCGCCCGC GGGCCAGGTG GTGCGCCTGT CCGACGGCAA GGCCACCGCC
TTCACCAGCC TGGCGAACCT CGCGGGCCAG CAGATCGACG GGCTCACGTT CAACCTCACC
ACCGCGGGCG CCACCGGCGA GCGCGTGATG TTCAGGCCGT TCAGCAGTGC GGCGCGGGAC
ATCGAGGCCA AGGTGCTGTC GCCGCGCGAC CTCGCCGCAG CGAGCCCCGT CAATGCCTCC
ATGGGCGCGG CGAACGCCGG CTCGCTGCAG CTCAGTTCCG TGAAGGCCGC CACCAGCCCC
TACACCGCCC CCCCGACGCC GGGCGGCGTG ACCCTCACCT TCACCGCGGG ACCGCCCTCC
ACCTACGGCG TGACGGGATC GACGGTGCCG GCCTCCGGCA CCACGGGTCT CGCTTATACG
CCGGGCCAGC CCATCACCAT CGACGGGTGG CAGATCACGC TCAAGGGCAC GCCGGGCACG
GGCGACACCG TGAAGGTGGG CAACGTGCTG GACGCGCAGT ATGGCGATGC CTACAAGCGC
AATGCCGGCA ACGCCTCGGC GATCGATGCG CTCGGCGACG TGAAGATGTT CGACGACGCC
ACGATGAGCG ACGGCTATGC GGGCCTCATG GCCCAGGTCG GCACGCGCAT GCAGAACGCC
AAGTACGCGT CGGACGTCTC GGCCACGATC TCCACCAACC TCGAACGCGA CCGCACCGCC
GTGTCGGGCG TGAACCTGGA CGAGGAAGCC GCCAAGCTGA TCCAGTACCA GCAGGCCTAC
CAGGCATCGG CCAAGGTGCT GCAGATCGCG CAGAGCATTT TCGACAACCT GATCCAGACG
ATGCGCTGA
 
Protein sequence
MSLLNVGARA LLANQVALQT TGHNIANVNT AGYSRQTLSL QTVQGQFTGG GYIGQGVDVQ 
TILRNHNELL TRQAAAADSV QASDKTRAER LSQMQDVFGG GTSGLGAAIT DMLNSFKDVV
ASPMDMTART VSITRMDETA ARMRSSAGRL DEIQYTVKEQ LTGDVNALNA LSKQMASVNE
QIARVKGNGQ TPNDLLDQRD QIIREINRYV QTTQVAADDG TVGLFVAGSQ PLVLGTTATP
LQVQESSMFP GSGQLKVYFS PPGIKPIELD DGMLGGGELS GLLRFHNNDL AEGRNLLGRM
AQAIGMTMNA QHKLGLTLDG EAGKDLFTVP ASMPGYTNGT AVGTVAFTDA TKFAASDYEV
RFTTPPAGQV VRLSDGKATA FTSLANLAGQ QIDGLTFNLT TAGATGERVM FRPFSSAARD
IEAKVLSPRD LAAASPVNAS MGAANAGSLQ LSSVKAATSP YTAPPTPGGV TLTFTAGPPS
TYGVTGSTVP ASGTTGLAYT PGQPITIDGW QITLKGTPGT GDTVKVGNVL DAQYGDAYKR
NAGNASAIDA LGDVKMFDDA TMSDGYAGLM AQVGTRMQNA KYASDVSATI STNLERDRTA
VSGVNLDEEA AKLIQYQQAY QASAKVLQIA QSIFDNLIQT MR