Gene Aave_4424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4424 
Symbol 
ID4665457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4916955 
End bp4917695 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID639825615 
ProductFis family transcriptional regulator 
Protein accessionYP_972738 
Protein GI120613060 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA TCATCTACAC CTCCATGACG GGCGCCAGCG CCGCCGCGCA ACGGCAGGCG 
GTGCTGGCCA ACAACCTCGC GAACGCCTCC ACCAACGGCT TCCGCGCGGA AATGTCCACC
TTCCGCTCGG TGCCCGTGCA GGGCGACGGC TCCAAGACCC GCGTGTTCGC GCTGGAGGCG
ACCTCCGGCC ACGTGGAAAC GCCCGGCCCC GTGCAGCGCA CCGGCCGCAA CCTGGATGCG
ATGGCGGTGG GCAACGCGTG GTTCGCGGTG CAGGGGCTGG ACGGCACCGA GGCCTACACC
CGCAACGGCA GCTTCGAGGT GAATGCGGAG GGCCAGCTGC GCACTTCCAA CGGGCTCACC
GTGCTGTCGG ACGGCGGCGG CCCGATCGAC GTGCCGCCCG GCGCCGACGT GACGCTGGGC
TCGGACGGCA CCCTCACCGC GCGCGTGGCG GGCCAGCAGG CCACGCCGAT CGGAAGGCTC
AAGCTCGCCA CCCCGACGCC GGAAGACCCG CTCAAGCGGG GCGACGACGC GCTCTTTCGC
ACCGCATCGG GCGACCCGAT ACCCAACGAC CCGAACGCGC GGCTGCTGTC CGGCGCGCTG
GAGGGCTCCA ACGTGAACGC CGTGGAAAGC ATGGTCGGCA TGATCGCCGC CTCCCGGCAG
TTCGAGGCCC AGATGCGGCT GCTGCAGACG GCCGAGACCA ACGACAAGAC AGCCGCCCAG
CTGCTCAGCC TGAACGGCTG A
 
Protein sequence
MDHIIYTSMT GASAAAQRQA VLANNLANAS TNGFRAEMST FRSVPVQGDG SKTRVFALEA 
TSGHVETPGP VQRTGRNLDA MAVGNAWFAV QGLDGTEAYT RNGSFEVNAE GQLRTSNGLT
VLSDGGGPID VPPGADVTLG SDGTLTARVA GQQATPIGRL KLATPTPEDP LKRGDDALFR
TASGDPIPND PNARLLSGAL EGSNVNAVES MVGMIAASRQ FEAQMRLLQT AETNDKTAAQ
LLSLNG