| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4423 |
|---|
| Symbol | |
|---|
| ID | 4665447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4915616 |
|---|
| End bp | 4916893 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639825614 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_972737 |
|---|
| Protein GI | 120613059 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCC AGCAAGGCCT GTCAGGCCTC AACGCGGCCA GCAAGAACCT GGACGTGATC
GGCCACAACG TGGCCAACTC CGGCACCGTC GGCTTCAAGG CTTCGCGCGC CGAGTTCGCC
GAAATGGTGG CCAATGCCAT CGGCTCCGCG GGCGGAACCA ATGCCGGCAT CGGGGTGGAA
CTGTCGGCGG TGGCGCAGCA GTTCAACCAG GGCAACATCT CCGTCACGGG CAACAGCCTG
GACGTGGCGA TCAACGGCGA CGGCTTCTTC ACGCTGCAGC AGCCCGACGG CTCGCACGCC
TACACCCGTG CCGGCAACTT CAAGCTCGAC AGCAACGGCC AGCTGGTGAC CAACACCAAG
GCGCAGGTCA TGGGCTATGC GCTGGACCCG ATCACCGGCA AGCGTACGGC CAGCAACGCC
GCGCCGCTCA CCTTCCCGAC CTCCAAGCCG ATTCCCGCCA AGCAGACCAC GACGATCACG
GCGGAATTCA ACCTCGACGC ACGCGCCCCC GATGCCGCCG GCGACGCCAC GGCCACGCCG
CCCGTGCCCG CCACGCCGCG CTCCACCTAC GGCACGTCCA TCAACGTGTA CGACAGCCAG
GGCGTGGCCA AGCCGGTGAG CCTGTACTTC CAGAAGAACG GCGCCAACAC CTGGGACGTG
TACGACAGGC TCGACGACGC CACCGCCAAT CCGCCGGTGG TGGCCACGCC CATCGGCCAG
ATCAAGTTCG ACAACAGCGG CAAGATCGTC TCGCCGGCCG CCACCGCACC GGAAACCGGC
TTCCAGATGC CGCTCACCGT GAAGCCCACT CCGCCCAACC CGAACGGGCT GGCCGACTAC
ACGGTGAACA TCAAGCTCGA CGGCGTGTCG CAATACGGCA AGGCGTTCGC AGTGTCCAAC
CTGTCGCAGG ACGGCTACAC GGCCGGCGAA CTCACGGGCA TCAGCATCGA GAACAACGGC
ACGGTGATGA CGCGCTACTC CAACGGCGTG ACACGCGCCG AGGGGCAGGT GGCGCTGGCC
AGCTTCCGCA ATACGCAGGG CCTGGCCTCG GTGGGCAACA ACAACTGGGT GGAAACCTTC
CAGTCGGGCC AGCCGGTGCT GGGCACGCCC ACCGAAGGCA AGTTCGGCGG CCTGCGCTCC
GGCGCGCTGG AGGATTCCAA CGTGGACCTC ACGGCCGAGC TGGTGAACAT GATGACCGCC
CAGCGTGCCT ACCAGGCCAA CGCGCAGACC ATCAAGACGC AGGACCAGGT GATGTCCACG
CTGGTGAACC TGCGCTGA
|
|---|
| Protein sequence | MSFQQGLSGL NAASKNLDVI GHNVANSGTV GFKASRAEFA EMVANAIGSA GGTNAGIGVE
LSAVAQQFNQ GNISVTGNSL DVAINGDGFF TLQQPDGSHA YTRAGNFKLD SNGQLVTNTK
AQVMGYALDP ITGKRTASNA APLTFPTSKP IPAKQTTTIT AEFNLDARAP DAAGDATATP
PVPATPRSTY GTSINVYDSQ GVAKPVSLYF QKNGANTWDV YDRLDDATAN PPVVATPIGQ
IKFDNSGKIV SPAATAPETG FQMPLTVKPT PPNPNGLADY TVNIKLDGVS QYGKAFAVSN
LSQDGYTAGE LTGISIENNG TVMTRYSNGV TRAEGQVALA SFRNTQGLAS VGNNNWVETF
QSGQPVLGTP TEGKFGGLRS GALEDSNVDL TAELVNMMTA QRAYQANAQT IKTQDQVMST
LVNLR
|
|---|
| |