| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4409 |
|---|
| Symbol | |
|---|
| ID | 4666600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4903397 |
|---|
| End bp | 4904335 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639825600 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_972723 |
|---|
| Protein GI | 120613045 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA AGAAGCTCCA GCCCATCATC ATCAAGCGCG TCAAGAAGGG CGGCCACGCC
GCCCATGGCG GCGCCTGGAA GATCGCCTAT GCCGACTTCG TGACGGCCAT GATGGCGTTC
TTCCTGCTCA TGTGGCTGCT GGGCTCGACC GCCAAGGGCG AGCTGCAGGG CATCGCCGCG
TATTTCGCGT CGCCGCTCAA GGTGGCCATG CAGGGCGGCG ACGGCTCGGG CAACAGCTCC
AGCATCATTC CCGGCGGGGG CAACGACCTC TCCAAGGTGC ACGGCCAGGT CCGGCGCTCG
GACTCCGACA CCGCCACCAG CCGCCGGACC AACATCGAGA ACGCGCGCGC CGAGCAGGCC
CGGCAGGACC AGATGCGGAT CAAGGCCCTG CAGGCCAAGA TCGACGCGCT GATCTCGGAA
AACCCGCGCC TGAAGGAGTT CAAGTCGCAG ATCCGCATCG ACGTGACACC CGACGGCCTG
CAGATCCAGA TCGTGGACGA CCAGAACCGC CCGATGTTCG ACAGCGGCAG TGCGTTGGTA
AAACCCTACA TGCGCGACAT TCTTCGGGAA ATCGGTTCCG CGCTCGGCGG GGTCGAAAAC
CGCATCAGCC TGGCCGGCCA CACCGACGCC GCACCCTACG GCAACGGGGA CCGGGGCTAC
AGCAACTGGG AGCTGTCGGC CGACCGCGCC AATGCCTCCC GGCGGGAGCT GGTGGCCGCG
GGCATGCCCG ATGCCAAGCT GGGCCGCGTG GTCGGCCTGG CCGCGAGCGA TCTGCTGGAA
CCTGACAACC CGCGCGCGCC CGTGAACCGG CGCATCACCA TCACGATTCT GACCAAGGAA
GCCGAGGAGC GGCTGCTGGG CAAAAAGGTC CCGCAGATCC CCATATCGGA ACTGGCCGCG
GAAAAGCGTG AAAATCCTGC ATCGACGCAG CAGCCGTAA
|
|---|
| Protein sequence | MADKKLQPII IKRVKKGGHA AHGGAWKIAY ADFVTAMMAF FLLMWLLGST AKGELQGIAA
YFASPLKVAM QGGDGSGNSS SIIPGGGNDL SKVHGQVRRS DSDTATSRRT NIENARAEQA
RQDQMRIKAL QAKIDALISE NPRLKEFKSQ IRIDVTPDGL QIQIVDDQNR PMFDSGSALV
KPYMRDILRE IGSALGGVEN RISLAGHTDA APYGNGDRGY SNWELSADRA NASRRELVAA
GMPDAKLGRV VGLAASDLLE PDNPRAPVNR RITITILTKE AEERLLGKKV PQIPISELAA
EKRENPASTQ QP
|
|---|
| |