| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4401 |
|---|
| Symbol | |
|---|
| ID | 4665933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4891856 |
|---|
| End bp | 4893334 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639825592 |
|---|
| Product | flagellin domain-containing protein |
|---|
| Protein accession | YP_972715 |
|---|
| Protein GI | 120613037 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCCA CCATCAACAC CAACATCAGC TCGCTCACCG CCCAGCGCAA CCTGAGCCTG
AGCCAGTCGT CGCTCAACAC CTCCATCCAG CGCCTGTCCT CCGGCCTGCG CATCAACAGC
GCCAAGGACG ATGCCGCCGG CCTGGCCATC TCGGAGCGGT TCACCTCGCA GATCCGCGGG
ATGAACCAGG CGGCGCGCAA TGCCAACGAC GGCATTTCGC TGTCCCAGGT GGCGGAAAGT
GCGCTGGCGG GCGCAGGGAA CATCCTGCAG CGGGTGCGCG AACTGTCGGT GCAATCGGCC
AACGCCACCA ATTCGGCAGG TGACCGCAAG GCCATCCAGG CCGAAGTCGG CCAGCTGCTG
TCCGAACTCG ACCGCATCGC CGGCACCACG GAATTCAACG GCCAGAAACT GCTGGACGGC
TCCTTCGGCT CGGCCACCTT CCAGGTCGGC GCCAACGCCA ACCAGACCAT CACGGCCACC
ACGGGCAACT TCCGCACCAT GAACTATGGT GCCCAGCTGA CGGCCTCCGC CACCGGCGCG
GCCACCACCG GCGCCACCGC CGGCTCGGCA GGCGCCGCCG CCGGCACGGT GGTCATCGGC
GGGCTGCAGA CCAAGACCGT CAACGTCGCG GCTGCCAGCA CGGCCGCCGA CATCGCCGCC
GCCGTCAACG CGGTGGCCGA CTCCACCGGC GTGACGGCCG CGGCCCGCAA CGTCTCGGAA
CTCAAGCTCA CCGGCAATGG TTCTTATTCT CTGGCGGTCA AGGGCGAGAA CAGCACCGCG
GCCAACGTGA CGTTCAACGT CTCGTCGAAC AGTTCGGCCG CAGGGCTGGC CGAAGCCGTG
AAGGCCTTCA ACGACGTGTC CTCGCAGACC GGCATCACCG CCAAGCTCAA CAGCGACAAC
ACCGGCCTGA TCCTGACCAA CGAGTCGGGC AAGGACATCA ACATCGCCAA CGGCGCCAGC
AGCGCCGCGG GCATCACGCT GGCCTCGCAG GACGCCGTCC AGACGTTGTC CTCGGGCAAC
CTGACCTTCA CGGCCGCCAC GACGGCCGCC ACCGGCGTCA CCGTGGCTGC GCGCGGCACG
GTGGAATACA ACTCCGACAA GGGCTACACC GTGAGCGGCA CGGGCGACAC CATGACGAAC
GCCGCGGCCA CCAGTTCCAA CATGAAGTCC GTGAGCACCA TCGACGTGTC GACGGTGGAC
GGTTCCACGC GCGCCTTGAA GATCATCGAT GCCGCGCTCG CGGCCGTCAA CGGCCAGCGT
GCGAACTTCG GCGCGTTGCA ATCACGGTTC GAAACCGCCA TCGCCAACCT GAATACCTCG
TCCGAGAACA TGTCCGCCTC GCGCAGCCGC ATCCAGGACG CGGACTTCGC GGCCGAAACC
GCCAACCTGT CGCGCTCGCA GATCCTGCAG CAGGCCGGCA CGGCGATGGT GGCCCAGGCC
AACCAGCTGC CCCAGGGCGT GCTGTCCCTG CTGAAGTAA
|
|---|
| Protein sequence | MASTINTNIS SLTAQRNLSL SQSSLNTSIQ RLSSGLRINS AKDDAAGLAI SERFTSQIRG
MNQAARNAND GISLSQVAES ALAGAGNILQ RVRELSVQSA NATNSAGDRK AIQAEVGQLL
SELDRIAGTT EFNGQKLLDG SFGSATFQVG ANANQTITAT TGNFRTMNYG AQLTASATGA
ATTGATAGSA GAAAGTVVIG GLQTKTVNVA AASTAADIAA AVNAVADSTG VTAAARNVSE
LKLTGNGSYS LAVKGENSTA ANVTFNVSSN SSAAGLAEAV KAFNDVSSQT GITAKLNSDN
TGLILTNESG KDINIANGAS SAAGITLASQ DAVQTLSSGN LTFTAATTAA TGVTVAARGT
VEYNSDKGYT VSGTGDTMTN AAATSSNMKS VSTIDVSTVD GSTRALKIID AALAAVNGQR
ANFGALQSRF ETAIANLNTS SENMSASRSR IQDADFAAET ANLSRSQILQ QAGTAMVAQA
NQLPQGVLSL LK
|
|---|
| |