| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4400 |
|---|
| Symbol | |
|---|
| ID | 4665758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4890043 |
|---|
| End bp | 4891521 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639825591 |
|---|
| Product | flagellin domain-containing protein |
|---|
| Protein accession | YP_972714 |
|---|
| Protein GI | 120613036 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCA CCATCAACAC CAACGTCAGC TCGCTCACCG CCCAGCGCAA CCTGAGCCTG
AGCCAATCCT CGCTCAACAC CTCCATCCAG CGCCTGTCCT CGGGCCTGCG CATCAACAGC
GCCAAGGACG ATGCCGCCGG CCTGGCCATC TCGGAGCGCT TCACCTCGCA GATCCGCGGC
CTGAACCAGG CAGTGCGCAA CGCCAACGAC GGCATTTCGC TGGCGCAGAC GGCGGAAGGC
GCCCTGAAGT CCACCGGCGA CATCCTGCAG CGCGTGCGTG AACTGGCAGT GCAGTCGGCC
AACGCCACCA ACTCCTCCGG CGACCGCAAG GCCATCCAGG CCGAAGTCGG CCAGCTGCTG
TCGGAAATGG ACCGCATCGC CGGCAACACC GAGTTCAACG GCCAGAAGCT GCTGGACGGC
TCCTTCGGCT CGGCCACCTT CCAGGTCGGC GCCAACGCCA ACCAGACCAT CACGGCCACC
ACCGGTAACT TCCGCACCAA CAATTATGGC GCCCAGCTGA CGGCTTCGGC CTCCGGTGCG
GCCACCACCG GCGCCACCGC CGGCTCGGCG GGCGCGGCCG CCGGCACGGT CGTGATCTCC
GGCCTGCAGA CCAAGACCGT CAACGTCGCG GCTGCCGGTA CGGCCGCCGA CATCGCCTCC
GCCGTCAACG CGGTGGCCGA CTCCACCGGC GTGACGGCCG CGGCCCGCAA CGTCTCGGAA
CTGAAGTTCT CCGGCACCGG CTCCTTCACC CTGGCCGTCA AGGGCGACAA CAGCACCGCG
GCCAACGTGA CGTTCAACGT CTCGGCCACC AGCACGGCCG CCGGCCTGGC CGAAGCCGTG
AAGGCCTTCA ACGACGTGTC CTCGCAGACC GGCATCACCG CCAAGCTCAA CAGCGACTCG
TCCGGCCTGA TCCTGACCAA CGAGTCGGGC AAGGACATCA ACCTCGCCAA CGGCGCCAGC
AGCGCCGCGG GCATCACGCT GGCCTCGCAG GACGCCACGA CCACGCAGTC TTCGGGCACG
CTGACGTTCA CTACCGCCAC GGCAGCAGCC ACCGGCGTGA CCGTCGCCTC GCGCGGCACG
GTGGAATACA AGTCCGACAA GGGCTACACC GTCAACGGCA CGGGCGACAC GATGACGACC
ACCGCGGCCA CCGCCTCCAC GCTGACCAAG GTGAGCGACA TCGATGTGTC CACCGTGGAC
GGCTCGACCA AGGCCCTGAA GATCATCGAT GCCGCGCTCG CGGCCGTCAA CGGCCAGCGT
GCGAGCTTCG GTGCGCTCCA GTCCCGGTTC GAAACCACGG TGAACAACCT GCAGAGCACG
TCCGAGAACA TGTCCGCCTC GCGCAGCCGC ATCCAGGACG CGGACTTCGC GGCCGAAACC
GCCAACCTGT CGCGCTCGCA GATCCTGCAG CAGGCCGGCA CGGCGATGGT GGCCCAGGCC
AACCAGCTGC CCCAGGGCGT GCTGTCCCTG CTGCGTTGA
|
|---|
| Protein sequence | MASTINTNVS SLTAQRNLSL SQSSLNTSIQ RLSSGLRINS AKDDAAGLAI SERFTSQIRG
LNQAVRNAND GISLAQTAEG ALKSTGDILQ RVRELAVQSA NATNSSGDRK AIQAEVGQLL
SEMDRIAGNT EFNGQKLLDG SFGSATFQVG ANANQTITAT TGNFRTNNYG AQLTASASGA
ATTGATAGSA GAAAGTVVIS GLQTKTVNVA AAGTAADIAS AVNAVADSTG VTAAARNVSE
LKFSGTGSFT LAVKGDNSTA ANVTFNVSAT STAAGLAEAV KAFNDVSSQT GITAKLNSDS
SGLILTNESG KDINLANGAS SAAGITLASQ DATTTQSSGT LTFTTATAAA TGVTVASRGT
VEYKSDKGYT VNGTGDTMTT TAATASTLTK VSDIDVSTVD GSTKALKIID AALAAVNGQR
ASFGALQSRF ETTVNNLQST SENMSASRSR IQDADFAAET ANLSRSQILQ QAGTAMVAQA
NQLPQGVLSL LR
|
|---|
| |