Gene Aave_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4396 
Symbol 
ID4668818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4887066 
End bp4887383 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content68% 
IMG OID639825587 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_972710 
Protein GI120613032 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCC GCATCTCCAG CTCCACCGCT CCCCTGACGG GCGCCGGCCT GGCGCGCCGT 
GCCACGGCCG CGCAGGACGC CGCAGGCGGC CAGGAAGTCG GCTTCTCCAC GGCGCTCAAG
GGCGCGCTGC AGTCCGTCAG CGCCGCCCAG AACCGGGCGA GCGGGCTGCA GCAGGAAGTG
CAGATGGAAA ACCCGGCCGT GAGCCTGGAA GAAACCATGA TCGCCATCCA GAAGGCCCAG
GTGGGTTTCC AGGCGACGCT GCACGTGCGC AACCGGATGG TACAGGCCTA CACGGACATC
ATGAACATGC AGGTCTGA
 
Protein sequence
MDLRISSSTA PLTGAGLARR ATAAQDAAGG QEVGFSTALK GALQSVSAAQ NRASGLQQEV 
QMENPAVSLE ETMIAIQKAQ VGFQATLHVR NRMVQAYTDI MNMQV