| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4395 |
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| Symbol | |
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| ID | 4668233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4885191 |
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| End bp | 4886891 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639825586 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_972709 |
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| Protein GI | 120613031 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAG TCGCCGAAAT CCCCGTCGCT CCCCCTGCCA GCTCCAGCGC GCCGTCCGTG
CTTCAGCGTT TTTCCGCGCT GGACCGTTCC AAGCGGCTGC GCTTCGGCGC GGGCATCGCG
CTGCTGGTGG CCGCGGTGGT CGCCGCGGTG GTGCTCAACC GGCAGCCGGA CTACAAGGTG
CTGTTCTCCA ATCTGAGCGA CAAGGATGGC GGCGCCATCG TGGCCCAGTT GTCCACGATG
AATGTCCCCT ACAAGTATTC GGAGGGCGGG GGCGCCATCC TGGTGCCGGC CGAGCGCGTG
CACGACGTCC GCCTGCGCCT GGCCACCCAG GGCCTGCCCA AGGGCTCGGT GACCGGGTTC
GAGCTCATGG AGACCAACCG CTTCGGCGTG ACGCAATTCC AGGAGCGCCT GAACTTCCAG
CGCGGGCTCG AGGGCGAACT GACGCGCTCC ATCCAGGCGC TGTCGTCCGT GCAGAGCGCA
CGCGTCCATC TGGCGCTGCC CAACCAGAAC GGATTTTTCC GCGAACAGCA GAAGCCTTCC
GCTTCCGTGC TGCTGAGCCT GTACCCCGGC CGCTTCCTCG ATCGCACCCA ACTGGCCGGC
ATCGTGCATC TGGTGGCTTC CAGCGTGCCC GAGATGTCGC CTTCCGCCGT CAGCGTGCTC
GACGATACCG GCAAGCTGCT GTCGCAATCG CCCGATACGG CCGCCGGCAG CGCCATCGAT
GCCCAGCAGC TGTCCTACGT GCAGCAGATC GAGCAGCAAT ACACCCGCCG CATCCTGGAC
ATCCTGGAGC CCGTGGTCGG CAAGAACAAC GTCAAGGCCC AGGTGACGGC CGAGGTGGAT
TTCTCGCAAT CGGAGCAGAC GTCCGAGCAG CACCGTCCCA ACCAGACGCC CGACAGCAGT
GCAGTGCGCA GCCAGCAGGT GGTGGAAAGC TCCGGCGGCA CCCAGGGCAA CCAGCCCCCG
GCCGGCGTTC CGGGCGCCGC CAGCAACCAG CCGCCCCAGC CGTCCACCGC CCCCATCAAC
GGCGCCAATC CCGCGCCCAC GGCAGGCAAC GGCCAGCAGG GCCAGGCGGC CGGGTCCAAG
CGTGAATCCA TCACCAACTA CGAGGTGGAC AAGACGGTGC GCGTTACCCG GGCCGGCAGC
GGCGCGATCA AGCGCGTCAG CGCCGCCGTG GTGGTGAACT ACCAGGCCAT CGCGGATGCG
GCGGGGAAGG CGCCCCAGGC CAAGGCCTTC ACGCCCGAGC AGATCGAGCA GATGACGGCC
CTGGTTCGCG AAACCATCGG GTACAGCAAG GATCGCGGCG ACTCGGTGAA CATCATGAAC
ACCCAGTTCC TGGTGGACAA CACGCCGGCG GTCGAGCTGC CGCTCTGGAA GCAGCCCGAG
ATGATCGAGC TGGCCAAGAG CCTGGGCTGG CCGGTGGGCA TGTCGCTCTT CGCCGCGCTC
ATCCTCCTCG GGCTGGTGCG TCCGGCGATC AAGGGCATGA ACCAGCCGCC CGCGCCCGCC
GCGGCGCCGG CATCGGGCCG CCAGGTGGAT GCGATCGAGG CCGACGAGCC CGAGCGCCCG
GCCCTGGCCG CCCCCGCCAA GCCCGAAGAC CTGATCCAGA CCCCCGAACA GATGCGCCTG
GAGGAAGCGC GTGTCCTGGC CAAGGAAAAT CCCGTGGCCG TCGCCAACAT TCTCAAGGTG
TGGGTAAACG GCGAATCTTG A
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| Protein sequence | MSAVAEIPVA PPASSSAPSV LQRFSALDRS KRLRFGAGIA LLVAAVVAAV VLNRQPDYKV
LFSNLSDKDG GAIVAQLSTM NVPYKYSEGG GAILVPAERV HDVRLRLATQ GLPKGSVTGF
ELMETNRFGV TQFQERLNFQ RGLEGELTRS IQALSSVQSA RVHLALPNQN GFFREQQKPS
ASVLLSLYPG RFLDRTQLAG IVHLVASSVP EMSPSAVSVL DDTGKLLSQS PDTAAGSAID
AQQLSYVQQI EQQYTRRILD ILEPVVGKNN VKAQVTAEVD FSQSEQTSEQ HRPNQTPDSS
AVRSQQVVES SGGTQGNQPP AGVPGAASNQ PPQPSTAPIN GANPAPTAGN GQQGQAAGSK
RESITNYEVD KTVRVTRAGS GAIKRVSAAV VVNYQAIADA AGKAPQAKAF TPEQIEQMTA
LVRETIGYSK DRGDSVNIMN TQFLVDNTPA VELPLWKQPE MIELAKSLGW PVGMSLFAAL
ILLGLVRPAI KGMNQPPAPA AAPASGRQVD AIEADEPERP ALAAPAKPED LIQTPEQMRL
EEARVLAKEN PVAVANILKV WVNGES
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