Gene Aave_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4393 
Symbol 
ID4669620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4883396 
End bp4884133 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content72% 
IMG OID639825584 
Productflagellar assembly protein FliH 
Protein accessionYP_972707 
Protein GI120613029 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCATT CGTATAGCCC CCGCGGCGCC TACACGCGCT TCATCCCGAG CGAAGAGATC 
GCGGACGTGA CGCAATGGCG TTTCGGGGCG GTGGACGGCT CCGACCAGCT TCCGCCGGTG
GAGGCGCAAC AGCCCGAGGC CGCCGAACTG CCCCCTCCAG GCATCGACGA GGCCACCCAC
CAGGCCGCGG TGGAGGCCGC GCGCGAGGAA GCCTTCGCCC AGGGCAAGGC CCAGGGCGAG
GAGGAAACCG CCCTGGCGTG GCAGCAGCGC ATGGACGACT ACATCGGCGG ACAGGGCCGG
GAGGCGGCCG CGCGGCTGGA GCGGCTGGTG CTCGCGGCCG ATGCCGGCCT TACCGATCTG
CAGCAGCGCA TGGCGCAGGA GATCCTGGAA CTGGCCTGCG ATATCGCCCG CCAGGTCGTC
CGGCAGGAAC TGTCCAGCGG GCCGCAGGCC CTGCTGCCCG TGGTGCGCGA AGCGCTGGGC
ATGCTGGTGG CCGAGGGGCG CCCGGCCACG GTGCGCATCC ATCCGTCCGA CTGGTCGTTC
CTGGAGCAGC CGCTCACCAC GGAGTACGCC GGGGCGAAGA TCCAGTGGGT GCCCGATGCC
TCCGTGGCCG AGGGCGACTG CCTGGTCGAA TCGGCCGGTA CCGTGGTGGA CGGCTCGCTC
GACAGGCGGT GGCGCCGCGC CATCGCGGCC CTGGGGCTTT CGTCGGCCTG GCGGATCGAG
GAGCCGGGCC ATGGCTGA
 
Protein sequence
MTHSYSPRGA YTRFIPSEEI ADVTQWRFGA VDGSDQLPPV EAQQPEAAEL PPPGIDEATH 
QAAVEAAREE AFAQGKAQGE EETALAWQQR MDDYIGGQGR EAAARLERLV LAADAGLTDL
QQRMAQEILE LACDIARQVV RQELSSGPQA LLPVVREALG MLVAEGRPAT VRIHPSDWSF
LEQPLTTEYA GAKIQWVPDA SVAEGDCLVE SAGTVVDGSL DRRWRRAIAA LGLSSAWRIE
EPGHG