Gene Aave_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4388 
Symbol 
ID4665133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4878230 
End bp4879234 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID639825579 
Productflagellar motor switch protein FliM 
Protein accessionYP_972702 
Protein GI120613024 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT CATTCCTTTC CCAGGAAGAA GTCGATGCCC TGCTGGAAGG CGTCACCGGC 
GAGAGCCAGA AGTCCGTGGA GGAAGCGGCG GACACCGGTG CCATCCGCAA CTACGACATC
TCCAGCCAGG AGCGCATCGT CCGTGGCCGC ATGCCGACGA TGGAAATCGT CAACGAGCGG
TTCGCGCGCA ATTTCCGCAT CGGCCTGTTC AACTTCATCC GCCGCAGCCC CGAGATCTCG
GTGGGAACAG TGTCCGTGCA GCGCTACAGC GCCTTCCTGC GCGAGCTGGC GGTGCCCACC
AACTTCAACA TCGTGGCCAT CCGGCCGCTG CGCGGCAGCG GACTGATCGT CTGCGAGCCG
TCCCTCGTGT TCGGCATCAT CGACACGCTC TACGGCGGCG TGGGCAAGTT CCAGACCCGC
ATCGAGGGCC GGGATTTTTC CCCCACCGAG CAGCGCGTCA TCAACCGCCT GGTGGACGTG
ATCTGCGCCG AATACAAGAA GGCCTGGCAC GGCATCTACC CGCTGGAGCT GGAATACCAG
CGCTCCGAGA TGCAGCCGCA GTTCGCGAAT ATCGCCACCC CGAGCGAGAT CGTGGTGTCC
ACCGCCTTCC AGCTCGAGAT CGGCGATCTG TCGGGGGCCA TCCACATCTG CATGCCCTAC
GCGACCCTGG AGCCGATCCG CGACGTGCTC TATTCTTCGA CGCAGGGTGA TTCGATCGAA
GTCGATCGCC GCTGGGTGCG CGTGCTGACG CGCGAGATCC AGGCCGCGGA AGTGACCCTC
GTGGCCGAAC TGGCCCGGGC CGACGCCACC GTCGAGCAAC TTCTCGCCAT GAAGCCCGGC
GATTTCATCG AGCTCGACCG CGAGCCACGC ATCCAGGCGT CGATCGGGGG CGTGCCCATC
TTCGAGTGCC AGTACGGCAC GCACAATTCC AAGTACGCCA TCCGCATCGA GGAGTGCCTG
CGCAACCCCG ATCTGAACTG GCTGGGAGAA AAGAATGTCA ACTGA
 
Protein sequence
MSESFLSQEE VDALLEGVTG ESQKSVEEAA DTGAIRNYDI SSQERIVRGR MPTMEIVNER 
FARNFRIGLF NFIRRSPEIS VGTVSVQRYS AFLRELAVPT NFNIVAIRPL RGSGLIVCEP
SLVFGIIDTL YGGVGKFQTR IEGRDFSPTE QRVINRLVDV ICAEYKKAWH GIYPLELEYQ
RSEMQPQFAN IATPSEIVVS TAFQLEIGDL SGAIHICMPY ATLEPIRDVL YSSTQGDSIE
VDRRWVRVLT REIQAAEVTL VAELARADAT VEQLLAMKPG DFIELDREPR IQASIGGVPI
FECQYGTHNS KYAIRIEECL RNPDLNWLGE KNVN