Gene Aave_4387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4387 
Symbol 
ID4665156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4877794 
End bp4878240 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID639825578 
Productflagellar motor switch protein FliN 
Protein accessionYP_972701 
Protein GI120613023 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTG AAGGCGACAG CAACGACAAC GACGGCAAGA GCGCGGCGGA CGATCCGTTC 
GCCGGCTGGG CCGAAGCGCT GGAGGAGCAG AAGAGCTCCG ACGAGTCGCA GCCCGTGGAC
CAGGGCGGCC CCCTCGCGGG CGAGCCCGTG CGCCCGTTCT CCTCGAGCAA CGAGGCGCCG
GTCAACGACA TCAACATGGT GCTGGACATC CCCGTCCAGT TGTCCGTGGA GCTGGGCCGT
ACCAAGGTGC CCATCAAGTA CATCCTGCAG CTGGCGCAGG GATCCGTCGT CGAGCTCGAC
GCCCTGGCCG GCGAACCCAT GGACGTGCTG GTCAACGGCT ACCTGATCGC CCAGGGCGAG
GTCGTGGTGG TCAACGACAA GTTCGGCATC CGGCTGACCG ACGTGGTCAC GCCTTCGGAG
CGGCTGCGCC GCGTGAGCCG TGGATAA
 
Protein sequence
MSTEGDSNDN DGKSAADDPF AGWAEALEEQ KSSDESQPVD QGGPLAGEPV RPFSSSNEAP 
VNDINMVLDI PVQLSVELGR TKVPIKYILQ LAQGSVVELD ALAGEPMDVL VNGYLIAQGE
VVVVNDKFGI RLTDVVTPSE RLRRVSRG