| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4359 |
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| Symbol | |
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| ID | 4669822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4843343 |
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| End bp | 4845706 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639825545 |
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| Product | peptidase C48, SUMO/Sentrin/Ubl1 |
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| Protein accession | YP_972673 |
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| Protein GI | 120612995 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5160] Protease, Ulp1 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.287822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACT TTTTCAACTT CGATATCAAC GGTTATCGCC GAATGACGGC AGCAGTGGAT
GCTTCTCATG GTTCGCCGCC CTCCCCAAGG GATGGAGGAA GCCGCACGCA GAGCTTCGAT
ATGCACCCGT TGCGCGAGGC TCTTCCCTCG CTGGAAACCG TGCACGGTCC TGTCCGGACC
ATGGTGCATT GCGCGCGTAA ACCTAAACCA GTGCCCAAGT CAGTCGTGGA ACTGGTGAAA
ATTCTCCCGA GATTTGGTAA GGGAGAAGCC TGGGAATCGC TGTGCCGAGA TTTCCCCGGT
ATACAAGTTT ATTTTTCAGA TTATGGAATC AATGAGCGTG GCTTCGGTTT CCTGCTGAAT
CACCTGGACA GCGAACAAAT TGACAATGTG GTGGAGCAGA CAGAAAACCG GATCAACATT
ATCTGTTCCG ACGATTTCAA AATTATCGCA TTGAAAACCG CGGCGACGAC AATCGAAACA
TGCCGCGCCA AATTCCAGGA ACACGCCAAA TTCCAGGAAC TCTCCAGCTC AACTCTCTCG
AATAAATCAG AAGGCAAATA CTACAGAAAC CTCATCGATA ATTTTATGGA TATCCTGGAC
AGGTTTGAAG CAGGAGAGAG CATACCCTCA TTGGCCGAAA CCGTGCCAGG CATCACCGGC
TTCATTGGGA ACCAGGGCTT CTCGAAAAAG GCCAAATATT TCCTGGAACA CATCAAACCC
GAGGAAAAGG AGCGGATAGA ACTTGCAGTC AAGCGCAGAA ACAAAAACGT GAGCGCACCG
AAGCCCTCCG GCGTACCGTC CCCGTTCAGC GGGACGCTCC GCTATATCCA TGAAAACCCC
GACTATCTGA TAAATACCTC GAAGGCATTC AGTAATCCAT CGAATTCCAT TGCAGACAAG
GTATGCGATA AAAACCTCAG CATCCACCTC CTGAAAAAAA TAGTCAACAT AGAAACCGGC
GAACTGACTG CTACCGGAGA GAAGCTCATT TCGAACGCCG ATCCCCAGAC CCGGCGTCTG
ATTCGCGCCA ACTTCAAGCT CCGTTTCCGG GTGCCCTCCA CGCCCGCGGC CGAAACCGCC
TCCCCTGCCC ATCAGGAGCC CTCTCACGGG CAGCACTATG CTGCGCCCAA TGATTCGTTC
TTTTCCGGAT TCTCGGGAGA AGTGCGCCGC TACCACGAAC CCTCGACGCC CCAGTACCCG
CCCGCTGCCC CGGCCTTCAG CGAAGCCGGC CCCTACCACG CCCCCTATTA CTACGGACAG
CCCTATGCTC CACCCGGTGA TTCGTTCTTT TCCGGATTCT CGGGAGAAGT GCGCCGCCAC
TACGAGCCCC CGACGCCCCA GTACCCTCCC GCCACCCCCG CATCCAGCGA GGCTTCCCTC
TATTACGACC CCTACTACAA CCCCTATCAC GGACAGCAAT ACGCTCCACC CGGCGATTCG
TTCTTTTCTG GATTCTCGGC AGAAGTGCGG CGCCACCACG AACCCTCGAC GCCACAGTAT
CCGCAGAACT CCACCTCCAC ATTCGGCGAT CTTTCATCCC TGAACGAAGG CGCGTATTCG
ACCCGCGATT TCGATCTCAA TACGCCGGCG GAAGTCACGC AGCCATGGCG GGGCGATGGT
TATGACGACG TCGAGTCGGC GGCCAGCCCC GAACGGATCG ACGTGGACGC CCTGCCTTCT
CCGCAGAACT CCTCCGCACC GGCAGGCCAG GAATTGGCCC TGGCCGAAGA GGAGTGGCTG
GGCGATGAGC ACCTGATCAC CTATGTCGGT ACCATCGCGG ACCGATTGCG GGGCCAGCCC
GGCGCGGACT TGCTCAATTT CGCCGACCCG CTGCTGGTGA CCCAGCTGAT CCAGGGGGAA
AGCGAGCAAC GGAACAACGC CATGTACCAC ATCATCGGCC GGGGCGGGCC CATCGTCTTC
CTGCCCGTGA ATGCGCCGGA CTCCCACTGG TCGCTGCTCG TCATCGACCA GCGTACCGGC
AATGCATTCC ACTACGACTC CCTGGTCTCT CCCGGGGACG CCAGGAACGC GGTCCACACA
CGCCAGTACC AGCTGGCCAG CAGGGCTGCG CGGGCCATGG GTATCACCGG GCCTGTCCAG
GGCATGCCCA TCGCCCGCCA GCGCGACGGC CATTCCTGCG GCGACCATGT GCTCCAGGCC
ACCGAACAGC TGGCCCAGAG CGTGATCGCC GGCACGTTCG GCCAGCCGGG CACCATGGAC
CTGAGCGATC TGCAGACGGA CCGCGGCCTC ATTGCCGACA CGATCGCCAA CGCCACCGCA
GACCGTAATG CGGAGCCGCC CCCCGCCACG TCCCGAACGC ACGAAAGGCC AGCGAAGAAA
AACAAGAAAT GGTGGAAGTT CTAG
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| Protein sequence | MDNFFNFDIN GYRRMTAAVD ASHGSPPSPR DGGSRTQSFD MHPLREALPS LETVHGPVRT
MVHCARKPKP VPKSVVELVK ILPRFGKGEA WESLCRDFPG IQVYFSDYGI NERGFGFLLN
HLDSEQIDNV VEQTENRINI ICSDDFKIIA LKTAATTIET CRAKFQEHAK FQELSSSTLS
NKSEGKYYRN LIDNFMDILD RFEAGESIPS LAETVPGITG FIGNQGFSKK AKYFLEHIKP
EEKERIELAV KRRNKNVSAP KPSGVPSPFS GTLRYIHENP DYLINTSKAF SNPSNSIADK
VCDKNLSIHL LKKIVNIETG ELTATGEKLI SNADPQTRRL IRANFKLRFR VPSTPAAETA
SPAHQEPSHG QHYAAPNDSF FSGFSGEVRR YHEPSTPQYP PAAPAFSEAG PYHAPYYYGQ
PYAPPGDSFF SGFSGEVRRH YEPPTPQYPP ATPASSEASL YYDPYYNPYH GQQYAPPGDS
FFSGFSAEVR RHHEPSTPQY PQNSTSTFGD LSSLNEGAYS TRDFDLNTPA EVTQPWRGDG
YDDVESAASP ERIDVDALPS PQNSSAPAGQ ELALAEEEWL GDEHLITYVG TIADRLRGQP
GADLLNFADP LLVTQLIQGE SEQRNNAMYH IIGRGGPIVF LPVNAPDSHW SLLVIDQRTG
NAFHYDSLVS PGDARNAVHT RQYQLASRAA RAMGITGPVQ GMPIARQRDG HSCGDHVLQA
TEQLAQSVIA GTFGQPGTMD LSDLQTDRGL IADTIANATA DRNAEPPPAT SRTHERPAKK
NKKWWKF
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