| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4330 |
|---|
| Symbol | |
|---|
| ID | 4668600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4807389 |
|---|
| End bp | 4808627 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639825516 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_972644 |
|---|
| Protein GI | 120612966 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.17422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCCTG AGGCGCCGCC CACCGCCGGC CTGCCCGTGG GCTGGCGCGA CCTGCTGCCC
GGCGGCGCTG CCGACTTGGG AAGCGCGCTG GCGCGCTTCC TGGGCGTGCC GTCGGTGCAG
ATCGAATGCT CCGGCACCGC AGCGCTGGTG GTGGCGCTCA CGGCACTGAG CGAGCAGGAA
CCCGGGCGCG ACGAGATCAT CGCCCCGGCC TACACCTGCC CCCTGGTCGC CCTGGCGGCC
GCGCACTGCG GCCTGCGGCT GCGCGTGTGC GACCTGCGGC CCGCCAGCCT GGACCTGTGC
CCGAACGCGC TGGCCGCGCT CTGCGGTCCG CGCACCCTGG CCGTGCTGCC CACGCACCTG
GCCGGCCGCG TGACCGACGT GGCCCCCGTG CGCGCCCTCG CCCATGCGGC GGGCGCCCGC
GTCATCGAGG ACGCGGCCCA GGCCCTGGGC GCGCGCGAGC AGGGCGGTGC CTGCATCGGC
ACCACGGGCA GCGACATGGT CTTCTTCAGC CTGGCCGTGG GCAAAGGGCT CACGATCTAC
GAAGGCGGCG CGCTGGTGGT GGCCGATCCC GGCCTGCGCG CGGCCTGCGC GCGCGCCGCC
CGCACGGTGG CCCCCTGGCG CTGGGGCTGG GAGCTGCGCC GCAGCGCCGA ACTGCTGGGC
TATGCCGCGC TCTACCGCCC GGCCGGCCTG CCGCTGGCCT ACGGCCTGCC GCTGCGCCGG
GCGCTGGCCC AGGGCGACCG CATCGCGGCG GCGGGGGACG ATTTCGACGA TGCCATCCCG
CTGCACCAGG TGGGCCGCTG GCGCCGCGCC GTGGGCGTGC GCGCGCTGGC CCGCCTGCCT
GCCTGGCTGG CCGAGGGCGA GGCACGGGCT CGGCACCGCA CGGCCCTGCT GCGCGAGCGC
GTTCCCGAAC TGCATGTGAT CGAGGACAGC GGCGCCGTGG CGGGCGCGCG GGGCACCTGG
CCCACGCTGC TGGTGCTGCT GCCCGACGCC GCCCGCCGGG AGGCCGCCAT CGCCGCACTG
TGGGGCCGGG GCCTGGGCGT GAGCCTGCCC TTCGTGCATG CGCTGCCCGA CTACCCGCGC
TATGCGCGGC ACGTCGCCCC GGGCCCGCGG GAGGGCTGGC CGCATGCCCG GGATTTCGCT
GCGCGCGTGC TCGCCATCGG CAACAGCCCC TGGCTGGACG ACGCCGGCTT CGACCGGATC
TGCGCGCTGC TGCAGCAGGC CGTGCGGACC GGCGGATGA
|
|---|
| Protein sequence | MVPEAPPTAG LPVGWRDLLP GGAADLGSAL ARFLGVPSVQ IECSGTAALV VALTALSEQE
PGRDEIIAPA YTCPLVALAA AHCGLRLRVC DLRPASLDLC PNALAALCGP RTLAVLPTHL
AGRVTDVAPV RALAHAAGAR VIEDAAQALG AREQGGACIG TTGSDMVFFS LAVGKGLTIY
EGGALVVADP GLRAACARAA RTVAPWRWGW ELRRSAELLG YAALYRPAGL PLAYGLPLRR
ALAQGDRIAA AGDDFDDAIP LHQVGRWRRA VGVRALARLP AWLAEGEARA RHRTALLRER
VPELHVIEDS GAVAGARGTW PTLLVLLPDA ARREAAIAAL WGRGLGVSLP FVHALPDYPR
YARHVAPGPR EGWPHARDFA ARVLAIGNSP WLDDAGFDRI CALLQQAVRT GG
|
|---|
| |