Gene Aave_4278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4278 
Symbol 
ID4665795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4743104 
End bp4744432 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content72% 
IMG OID639825464 
Productextracellular solute-binding protein 
Protein accessionYP_972592 
Protein GI120612914 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTGCC CAGCCGACGA CTCCACGACG CTTCCGCTCC GTTGCCCCGC CCCTGCGCCG 
CGGGGCCGCG CGCCGTGGCG CGGTTGCCTG GCGGGCATCG CGCTCATGGC GCACGCGGCG
TTCGCGGTCC CGGCCCACGC AGGGGCGGAC GGCGTCTCGG TGCTCCACTG GTGGGTGTCC
GGCGGAGAGC GGGCGAGCAT GGACGCGATC CGCGACTTCA CCACCGGGCG CGGCATCGCA
TGGAGCGAGT TCTCCACCCC CGGCAGCGGC ACGGCGCGCT ATACGGACGT GCTGGCCGCG
CGGGTGCGCG CGGGGCGGAT TCCCACGGCC GCGCAGATGA TCGGCTACGA CATCCACGCA
TGGGCCCGCC GGGGCCTGCT CGACGACCTG GACGACATCG CCGCACGCGA GGAGTGGGAC
GAGGTCGTGC CCGACGAGAT CCAGCGGCTG TCCAAATGGC AGGGCCGGTG GGTGGCGGCG
CCCTTCAACG CGCATTCCAC GAACTGGCTC TGGCTGAACA AGCACGTCGC GGACCGCCTC
GGCATCACCC GGCCGCCCGA CACGTGGGCG GACCTGATCG CCCTGCTCGA CCGCGCGCGC
GCCGCGGGTG TGCCGCCCAT CGCCATAGGC CACGAAGCGT GGGAGCACAC CCTGCTCTTC
GAGTCGGTGG CGGCCGGCGT GGGCGGTGCC GCCTTCTACC GCCGGGCGTT CGTGGACCTC
GACCCTTCAG CGCTCACCGA TGCCGTGGCG ACGACCATCT TCGACCGGAT GCGGCAGCTG
TCCGGCTATC TGGAGCCCGG CTACATGCAG CGACGCTGGG ACGAGGCCAC GGACCGCGTG
GCGCGCGGCC GCGCGCTGCT GCAGGTGCAG GGCTTCTGGG TGGATGGGGA ACTGCGCGTG
CGCGGCCTGT ACGCCGGCGT GGATTACCAG TGCTGGCGCT TTCCCGACAC GCAGGGCATG
GTGCTGTTCA ACAGCGACCA GTTCATCTTC TTCCGCCGCC CGGCCGGCGA GCGTGCCGCG
CAGCTGCGCT TCGCCTCCGC CCTCATGGAC CGCGAACTGC AGACATCCGT CAACCTGCGC
ACCGGCGCCG CGCCCGCGCG GGTGGACGTC CGCAAAGCCC TTTTCAACAC CTGCGGCCGC
CAGGCCATCG CCGAGTTGCG CGGCGCCAAC ATGCGCCGGA CCCTGCTCGG ATCCATCGGC
ATGGGCAACG CCCACCCCTC CAGCGTGAAA ATCGCCATCT ACGAAGTGGT CACGCGCCAC
CTGCAGCGCA GGATCGACAC GCCGGCCGCG GTGGCGGCGC TGCGCCAGGC GATCACGCCC
CACCGCTGA
 
Protein sequence
MHCPADDSTT LPLRCPAPAP RGRAPWRGCL AGIALMAHAA FAVPAHAGAD GVSVLHWWVS 
GGERASMDAI RDFTTGRGIA WSEFSTPGSG TARYTDVLAA RVRAGRIPTA AQMIGYDIHA
WARRGLLDDL DDIAAREEWD EVVPDEIQRL SKWQGRWVAA PFNAHSTNWL WLNKHVADRL
GITRPPDTWA DLIALLDRAR AAGVPPIAIG HEAWEHTLLF ESVAAGVGGA AFYRRAFVDL
DPSALTDAVA TTIFDRMRQL SGYLEPGYMQ RRWDEATDRV ARGRALLQVQ GFWVDGELRV
RGLYAGVDYQ CWRFPDTQGM VLFNSDQFIF FRRPAGERAA QLRFASALMD RELQTSVNLR
TGAAPARVDV RKALFNTCGR QAIAELRGAN MRRTLLGSIG MGNAHPSSVK IAIYEVVTRH
LQRRIDTPAA VAALRQAITP HR