Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4278 |
Symbol | |
ID | 4665795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4743104 |
End bp | 4744432 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825464 |
Product | extracellular solute-binding protein |
Protein accession | YP_972592 |
Protein GI | 120612914 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTGCC CAGCCGACGA CTCCACGACG CTTCCGCTCC GTTGCCCCGC CCCTGCGCCG CGGGGCCGCG CGCCGTGGCG CGGTTGCCTG GCGGGCATCG CGCTCATGGC GCACGCGGCG TTCGCGGTCC CGGCCCACGC AGGGGCGGAC GGCGTCTCGG TGCTCCACTG GTGGGTGTCC GGCGGAGAGC GGGCGAGCAT GGACGCGATC CGCGACTTCA CCACCGGGCG CGGCATCGCA TGGAGCGAGT TCTCCACCCC CGGCAGCGGC ACGGCGCGCT ATACGGACGT GCTGGCCGCG CGGGTGCGCG CGGGGCGGAT TCCCACGGCC GCGCAGATGA TCGGCTACGA CATCCACGCA TGGGCCCGCC GGGGCCTGCT CGACGACCTG GACGACATCG CCGCACGCGA GGAGTGGGAC GAGGTCGTGC CCGACGAGAT CCAGCGGCTG TCCAAATGGC AGGGCCGGTG GGTGGCGGCG CCCTTCAACG CGCATTCCAC GAACTGGCTC TGGCTGAACA AGCACGTCGC GGACCGCCTC GGCATCACCC GGCCGCCCGA CACGTGGGCG GACCTGATCG CCCTGCTCGA CCGCGCGCGC GCCGCGGGTG TGCCGCCCAT CGCCATAGGC CACGAAGCGT GGGAGCACAC CCTGCTCTTC GAGTCGGTGG CGGCCGGCGT GGGCGGTGCC GCCTTCTACC GCCGGGCGTT CGTGGACCTC GACCCTTCAG CGCTCACCGA TGCCGTGGCG ACGACCATCT TCGACCGGAT GCGGCAGCTG TCCGGCTATC TGGAGCCCGG CTACATGCAG CGACGCTGGG ACGAGGCCAC GGACCGCGTG GCGCGCGGCC GCGCGCTGCT GCAGGTGCAG GGCTTCTGGG TGGATGGGGA ACTGCGCGTG CGCGGCCTGT ACGCCGGCGT GGATTACCAG TGCTGGCGCT TTCCCGACAC GCAGGGCATG GTGCTGTTCA ACAGCGACCA GTTCATCTTC TTCCGCCGCC CGGCCGGCGA GCGTGCCGCG CAGCTGCGCT TCGCCTCCGC CCTCATGGAC CGCGAACTGC AGACATCCGT CAACCTGCGC ACCGGCGCCG CGCCCGCGCG GGTGGACGTC CGCAAAGCCC TTTTCAACAC CTGCGGCCGC CAGGCCATCG CCGAGTTGCG CGGCGCCAAC ATGCGCCGGA CCCTGCTCGG ATCCATCGGC ATGGGCAACG CCCACCCCTC CAGCGTGAAA ATCGCCATCT ACGAAGTGGT CACGCGCCAC CTGCAGCGCA GGATCGACAC GCCGGCCGCG GTGGCGGCGC TGCGCCAGGC GATCACGCCC CACCGCTGA
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Protein sequence | MHCPADDSTT LPLRCPAPAP RGRAPWRGCL AGIALMAHAA FAVPAHAGAD GVSVLHWWVS GGERASMDAI RDFTTGRGIA WSEFSTPGSG TARYTDVLAA RVRAGRIPTA AQMIGYDIHA WARRGLLDDL DDIAAREEWD EVVPDEIQRL SKWQGRWVAA PFNAHSTNWL WLNKHVADRL GITRPPDTWA DLIALLDRAR AAGVPPIAIG HEAWEHTLLF ESVAAGVGGA AFYRRAFVDL DPSALTDAVA TTIFDRMRQL SGYLEPGYMQ RRWDEATDRV ARGRALLQVQ GFWVDGELRV RGLYAGVDYQ CWRFPDTQGM VLFNSDQFIF FRRPAGERAA QLRFASALMD RELQTSVNLR TGAAPARVDV RKALFNTCGR QAIAELRGAN MRRTLLGSIG MGNAHPSSVK IAIYEVVTRH LQRRIDTPAA VAALRQAITP HR
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