| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4275 |
|---|
| Symbol | |
|---|
| ID | 4668837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4737052 |
|---|
| End bp | 4738080 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639825461 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_972589 |
|---|
| Protein GI | 120612911 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.329144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCATC CACCAGCGCC TGAGCGCGAC GACCTCCACC CCTACGCCCT CCTCACGCCC
GACCTCGTGC TGGACGCGCT CGCGTCCATC GGCCTGCACG GCGACGGCCG GCTCATGGCC
CTGGGTTCCT ACGAGAACCG CGTCTATCAG GTACACCTGG AGGACGGCAC GCGCGTGGTC
GCCAAGTTCT ACCGCCCGGG CCGCTGGAGC GAGGCGCAGA TCCTGGAGGA GCATGCCTTC
TCCGCCGAGC TGGCCGAAGC CGAGGTGCCG GTCGTCGCAC CGCTCGCCGT GGAGGGCCGC
ACGCTGCACG CGCATGCGGG CTTCGCGTTT TCCGTGAGCC CCTGGCGCGG CGGCCGCACG
CCCGACCTGG ACGACTTCGA GGCCCTGGAA TGGATCGGCC GCTTTCTCGC GCGCATCCAC
ACCGTGGGCG CGGCGCGGCC GTTCGCGCAC CGCCCGGCGC TGGATGTGCG CAGCTTCGCC
GCCGAGCCGC GCGACGCCCT GCTGCAGGCG GAGGCGATCC CGCTGGACCA GCAGTCGGCC
TGGACCGCCG CCTGCGGCGA TGCCATCGCG CTGATCGAGG AAAAGATGGC GGGCACCGGT
GCCACCGCGC CGTGTGCCGT GCTGCGCCTG CACGGCGACT GCCACCCGGG CAACGTGCTC
TGGACGCCCG CCGACCTGCC CGGCGGCGGG CCGCATTTCG TGGACCTGGA CGACGCGCGC
ATGGGCCCGG CCGTGCAGGA CCTGTGGATG CTGCTGTCGG GCGAGCGGCG CCAGCGCACG
CAGCAACTCT CGGCCCTGCT GGACGGCTAC GAGCAGTTCC GGGACTTCGA CCGCCGCGAA
CTCGCGCTGA TCGAGCCGCT GCGCACGCTG CGCCTCATCC ATTACAGCGC CTGGCTCGCG
CGGCGCTGGA GCGATCCGAT CTTCCCGATC AACTTCCCGT GGTTCGGCAG CAGCGATTAC
TGGCGCGGCC AGGTGGACAT GCTGCGCGAG CAGATCGAGG CGATGCAGGA GGAGCCGCTG
GCGGCGTGA
|
|---|
| Protein sequence | MHHPPAPERD DLHPYALLTP DLVLDALASI GLHGDGRLMA LGSYENRVYQ VHLEDGTRVV
AKFYRPGRWS EAQILEEHAF SAELAEAEVP VVAPLAVEGR TLHAHAGFAF SVSPWRGGRT
PDLDDFEALE WIGRFLARIH TVGAARPFAH RPALDVRSFA AEPRDALLQA EAIPLDQQSA
WTAACGDAIA LIEEKMAGTG ATAPCAVLRL HGDCHPGNVL WTPADLPGGG PHFVDLDDAR
MGPAVQDLWM LLSGERRQRT QQLSALLDGY EQFRDFDRRE LALIEPLRTL RLIHYSAWLA
RRWSDPIFPI NFPWFGSSDY WRGQVDMLRE QIEAMQEEPL AA
|
|---|
| |