Gene Aave_4270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4270 
Symbol 
ID4667516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4732551 
End bp4733366 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content74% 
IMG OID639825456 
Product2-dehydro-3-deoxyglucarate aldolase 
Protein accessionYP_972584 
Protein GI120612906 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.755351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.6903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGC CCAACCGCTT CAAGCGCGCG CTCGCCGCCG GCCAGCCGCA GATCGGACTC 
TGGTCCACCC TGGCCTCGCC CTATGCGAGC GAACTGCTCG CGGGCGCGGG CTTCGACTGG
ATGCTGCTGG ACACCGAGCA TTCGCCCAGC GACGTGCCGC ACATGCTGCA GCAACTGCAG
GCCGTGGATG CCGAGCGCGA CGGGCGCACG GCCGCCGTGG TGCGGCCCGC ATGGAACGAC
CCGGTGCTCA TCAAGCGCTA CCTCGACATC GGCGCGCAGA GCCTGCTGCT GCCCTTCGTG
CAGAACGCCG ACGAGGCGCG CGCCGCGGTG GCCGCCATGC GCTACGCACC GCGCGGCATC
CGCGGCATGG GCGGGTCGGT GCGGGCCACC CGCTTCGGGC GCGACACCGG CTACCTCGCG
CAGGCCGAGA ACGAGCTGTG CCTGCTCGTG CAGGTGGAGA CGGCCGAGGC ACTGGAACGC
ATCGAGGACA TCGCCGCGTT GGACGGCGTG GACGGCATCT TCATCGGCCC CGCCGACCTC
TCGGCCAGCA TGGGGCACGC GGGCCGGCCT CAACACCCCG AGGTGCGCTC GGCCATCGAC
GGCGCCATCC GCCGCATCCG CGCCTGCGGC AAGGCCCCCG GCATCCTCAT GGCCGACGAG
GCCCGGGCGC GCGAATGCCT GGACCTCGGC GCGCTCTTCG TGGCCGTGGC CATCGACATG
CTGCTGCTGC GCCAGGGCGC CGACGCCGCG GCCGCGAGGT TCCGGGGCGG CGCTGGCGCG
GCACCGCGGC AGCCCCCGGC CTCGCTCCCC TACTGA
 
Protein sequence
MPQPNRFKRA LAAGQPQIGL WSTLASPYAS ELLAGAGFDW MLLDTEHSPS DVPHMLQQLQ 
AVDAERDGRT AAVVRPAWND PVLIKRYLDI GAQSLLLPFV QNADEARAAV AAMRYAPRGI
RGMGGSVRAT RFGRDTGYLA QAENELCLLV QVETAEALER IEDIAALDGV DGIFIGPADL
SASMGHAGRP QHPEVRSAID GAIRRIRACG KAPGILMADE ARARECLDLG ALFVAVAIDM
LLLRQGADAA AARFRGGAGA APRQPPASLP Y