| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4269 |
|---|
| Symbol | |
|---|
| ID | 4666670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4731660 |
|---|
| End bp | 4732508 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639825455 |
|---|
| Product | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
|---|
| Protein accession | YP_972583 |
|---|
| Protein GI | 120612905 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR02312] 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.238552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.686193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CGTCCGCTGC ATCCTCTCCT CCCGCACCCG CCCTGTCGGC AGACCAGCTC
GGCGAAGCGG CGCGGCAACT CGACGAGGCC GAACGCACGC GCGTGCCCTG CGCCCAGTTC
TCGCGACAGT ATCCGGACAT GGGCATCGAT GATGCCTACG CGATCCAGGA CGCGTGGATG
CAGCGCAAGC AGGCCCGGGG CCGGCGCGTC ATCGGCCACA AGATCGGGCT CACGTCCAAG
GCGATGCAGC GCGCCGTGAA CATCGCGGAG CCGGACTTCG GCACGCTGCT GGACGACATG
CTCTACCGCG ACGGCGCGAG CCTGCCGGCC GACCGCTTCC TGCAGCTGCG CATCGAGGCC
GAGCTCGCCT TCGTGCTCGC GCGGCCCTTG GCAGGCCCGC ACTGCACGCT CTACGACGTG
CTCGACGCCA CGGCCTACGT CACCCCGGCG CTGGAGATCC TGGACGCGCG CATCCAGCGC
GTGGACCCGG AGACCGGCCG CACGCGCACC GTCATCGACA CCATCTCCGA CAACGCGGCC
AACGCCGCAC TGGTGCTCGG CGGCCGGCCT TTCAGGCCCG CGCTGCTCGA CGCGGATCTG
CGGCGCATCG GCGCCATCGT CACGCGCAAC GGCGACGTGG AAGAGACCGG GCTCGCGGCC
GGCGTGCTGA ACCATCCCGC CAACGGCGTG GCCTGGCTCG CCAACCGGCT GCACCGCCAC
GGCATCGCGC TGCAGGCCGG CGAAGTGGTG CTCGCGGGGT CGTTCATCCG GCCCATCGAC
GTGGCCCGTG GCGATACCAT CGTGGCGGAC TACGGCGAGT TCGGCACCGT TGCGTGCCAC
TTCGGCTGA
|
|---|
| Protein sequence | MSAASAASSP PAPALSADQL GEAARQLDEA ERTRVPCAQF SRQYPDMGID DAYAIQDAWM
QRKQARGRRV IGHKIGLTSK AMQRAVNIAE PDFGTLLDDM LYRDGASLPA DRFLQLRIEA
ELAFVLARPL AGPHCTLYDV LDATAYVTPA LEILDARIQR VDPETGRTRT VIDTISDNAA
NAALVLGGRP FRPALLDADL RRIGAIVTRN GDVEETGLAA GVLNHPANGV AWLANRLHRH
GIALQAGEVV LAGSFIRPID VARGDTIVAD YGEFGTVACH FG
|
|---|
| |