Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4262 |
Symbol | |
ID | 4669829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4725489 |
End bp | 4726298 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639825448 |
Product | IclR family transcriptional regulator |
Protein accession | YP_972576 |
Protein GI | 120612898 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.647357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCGCT CTCCTCCCGA CACTGACGTC CCGCGCGACG GCGCGCAGAG CGTGCGCCGC GCCATCGCGG TGCTGCGCAT CGTCGCGGGG GGGCAGGAAA GCGGCGTGCG GCTGATCGAC GTCTCGCTGG CCACGGGGCT CAACCGCCCC ACGGCGCACC GCCTGCTGCG CGCGCTGGTG CAGGAGGGCG CGGTGGAGCA GGACGCGGCC ACGCGCCGCT ACCGCATCGG CCGGGAGGTC TCGCTCATGG GGCTGGCGCG GCCCGCGGGC TTTCCGCTGC GCGCGATCGC CGCGCCGCAC CTGCGGCACC TGGGAGAAAC GCTGGGAGAA ACCGCCTTCC TCACCATCCG CCAGGGCGAT GATTCGGTGT GCCTGGATCG GGCCATCGGC AGCTACCCCG TCAAGGTGCT GTCCATCGAC GTGGGCGCGC GCCGGCTGCT GGGAGTGGGC GTGAGCGGCG TGGTGCTGCT CGCCGCGCTG GATGCCGCGG AGGCCGCGGA GATCCTCGGG CGCAACGCCG CCCGCCTGCG GGCCCTGCGG CTCGATGCCG CGGACGTGCT GGAGCGCTGC GCGCAGGCGC GCGCACTGGG CCATGCCTAT GCGCCCGTGG GCGTGGTGCG CGGCACGCGC GCGGTGGCCG TACCGGTGCG CACGCCCGCC GGCCGCACGG TGGCGGCGAT CGCCGTCACG GCGATCACCT CGCGCCTGAC CGAGGCGCGC CTGCCGCAGG TGGTGCAGGC CATGCAGGCG CAGGCCGGAG ACATCGGCCG CGAGGCACAG GCGCGCGGCC TCGGCGGCAC CCCTCAATAG
|
Protein sequence | MSRSPPDTDV PRDGAQSVRR AIAVLRIVAG GQESGVRLID VSLATGLNRP TAHRLLRALV QEGAVEQDAA TRRYRIGREV SLMGLARPAG FPLRAIAAPH LRHLGETLGE TAFLTIRQGD DSVCLDRAIG SYPVKVLSID VGARRLLGVG VSGVVLLAAL DAAEAAEILG RNAARLRALR LDAADVLERC AQARALGHAY APVGVVRGTR AVAVPVRTPA GRTVAAIAVT AITSRLTEAR LPQVVQAMQA QAGDIGREAQ ARGLGGTPQ
|
| |