Gene Aave_4262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4262 
Symbol 
ID4669829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4725489 
End bp4726298 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content76% 
IMG OID639825448 
ProductIclR family transcriptional regulator 
Protein accessionYP_972576 
Protein GI120612898 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.647357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT CTCCTCCCGA CACTGACGTC CCGCGCGACG GCGCGCAGAG CGTGCGCCGC 
GCCATCGCGG TGCTGCGCAT CGTCGCGGGG GGGCAGGAAA GCGGCGTGCG GCTGATCGAC
GTCTCGCTGG CCACGGGGCT CAACCGCCCC ACGGCGCACC GCCTGCTGCG CGCGCTGGTG
CAGGAGGGCG CGGTGGAGCA GGACGCGGCC ACGCGCCGCT ACCGCATCGG CCGGGAGGTC
TCGCTCATGG GGCTGGCGCG GCCCGCGGGC TTTCCGCTGC GCGCGATCGC CGCGCCGCAC
CTGCGGCACC TGGGAGAAAC GCTGGGAGAA ACCGCCTTCC TCACCATCCG CCAGGGCGAT
GATTCGGTGT GCCTGGATCG GGCCATCGGC AGCTACCCCG TCAAGGTGCT GTCCATCGAC
GTGGGCGCGC GCCGGCTGCT GGGAGTGGGC GTGAGCGGCG TGGTGCTGCT CGCCGCGCTG
GATGCCGCGG AGGCCGCGGA GATCCTCGGG CGCAACGCCG CCCGCCTGCG GGCCCTGCGG
CTCGATGCCG CGGACGTGCT GGAGCGCTGC GCGCAGGCGC GCGCACTGGG CCATGCCTAT
GCGCCCGTGG GCGTGGTGCG CGGCACGCGC GCGGTGGCCG TACCGGTGCG CACGCCCGCC
GGCCGCACGG TGGCGGCGAT CGCCGTCACG GCGATCACCT CGCGCCTGAC CGAGGCGCGC
CTGCCGCAGG TGGTGCAGGC CATGCAGGCG CAGGCCGGAG ACATCGGCCG CGAGGCACAG
GCGCGCGGCC TCGGCGGCAC CCCTCAATAG
 
Protein sequence
MSRSPPDTDV PRDGAQSVRR AIAVLRIVAG GQESGVRLID VSLATGLNRP TAHRLLRALV 
QEGAVEQDAA TRRYRIGREV SLMGLARPAG FPLRAIAAPH LRHLGETLGE TAFLTIRQGD
DSVCLDRAIG SYPVKVLSID VGARRLLGVG VSGVVLLAAL DAAEAAEILG RNAARLRALR
LDAADVLERC AQARALGHAY APVGVVRGTR AVAVPVRTPA GRTVAAIAVT AITSRLTEAR
LPQVVQAMQA QAGDIGREAQ ARGLGGTPQ