Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4261 |
Symbol | |
ID | 4665656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4724647 |
End bp | 4725495 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639825447 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_972575 |
Protein GI | 120612897 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.642179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA ACACCGTCGG CATCATCGGC GCGGGCACCA TGGGCAACGG CATCGCGCAG GCCTGCGCGG TCGCCGGCAT CGACGCGGTG ATGGTGGACA TTTCCGACGC GGCCGTGAAA AAGGGCCTCG CCACCGTGTC CGGCAGCCTG GACCGGCTCA TCAAGAAGGA AAAGATCACC GCGGCCGACA AGGACGCGGC GCTGGCGCGC ATCAGGACCT CGACGAACTA CGACGACCTG AAGGCCGCGC AGCTCATCAT CGAGGCCGCC ACCGAGAACC ACGAACTCAA GGTGAAGATC CTCGAGCAGG TGGACGCGAT CGCCGCGCCC GATGTGATCG TGGCCTCCAA CACCTCGTCG ATCTCGATCA CGCAACTGGC CGCCGCCACC TCGCGGCCCG ACCGCTTCAT CGGCATGCAC TTCTTCAACC CGGTGCCGAT GATGGCGCTG GTGGAGATCA TCCGCGGCCT GCAGACCAGC GACGCCACGC ACGACGCCGT GAAGGCGCTG GCCGAGCGCC TGGGCAAGAG CCCCATCACG GTGAAGAACG CGCCGGGCTT CGTCGTGAAC CGCATCCTGG TGCCGATGAT CAACGAGGCC TTCTTCGTGC TGGCCGAGGG CCTGGCCACG CCGGAAGACA TCGACGCCGG CATGAAGCTC GGCTGCAACC AGCCGATCGG CCCGCTGGCG CTGGCCGACA TGATCGGCCT GGACGTGTGC CTGGCGGTGA TGAATGTCTA TCTGGAAGAG TTCGGCGACA GCAAGTACCG GCCCTGCCCG CTGCTCAAGG AAATGGTGGC CGCGGGGCGC CTGGGCCGCA AGACGGGCCA GGGGGTGTAC AGCTATTGA
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Protein sequence | MTINTVGIIG AGTMGNGIAQ ACAVAGIDAV MVDISDAAVK KGLATVSGSL DRLIKKEKIT AADKDAALAR IRTSTNYDDL KAAQLIIEAA TENHELKVKI LEQVDAIAAP DVIVASNTSS ISITQLAAAT SRPDRFIGMH FFNPVPMMAL VEIIRGLQTS DATHDAVKAL AERLGKSPIT VKNAPGFVVN RILVPMINEA FFVLAEGLAT PEDIDAGMKL GCNQPIGPLA LADMIGLDVC LAVMNVYLEE FGDSKYRPCP LLKEMVAAGR LGRKTGQGVY SY
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