Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4259 |
Symbol | |
ID | 4665777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4722759 |
End bp | 4723706 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825445 |
Product | ABC transporter-related protein |
Protein accession | YP_972573 |
Protein GI | 120612895 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.493495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACAT CCTCCCCGCT TTTCGAGATC GCCCACCTGC GCAAGCGCTA CGGCGGCACC GCCGTGGTGG ACGACCTGTC GCTGTCCATC GCGCCGGGCG AATGCCTGGG CGTGATCGGG CCCAACGGCG CGGGCAAGAC CACCACGCTG CGCATGTGCC TGGGCCTCAC GGCGCCCGAC GAAGGCAGCG TGCGCTTCCA CCCGCCGGGC GGCGGCGCGC CGCTGCTCAT GCCGCGGGAC GCGCGCGCCA TCAAGGCGCA GCTGGGCGTG GTGACGCAGT TCGACACTCT CGACCCGGAT TTCACCTGCG CGGAGAACCT GCACGTGTTC GGCCGCTACT TCGGCCTGCG CGGACGGACG ATGGACGAGC GCGTGCCGCG GCTGCTGGAG TTCGCCGCCC TCTCCCACAA GGCCGGTGCG AAGCCGGGCG AACTCTCGGG CGGCATGAAG CGGCGCCTCT CGCTCGCGCG GGCGCTGGTG AACGATCCCG CGCTGCTGCT GCTCGACGAG CCCACCACGG GCCTGGACCC GCAGGCCCGC CACCTGATGT GGGAACGCCT GCAGCAGTTG CTGCAGCAGC AGGGCAAGTC GATCCTGCTC ACCACCCACT TCATGGACGA GGCCGAGCGC CTGTGCACGC GGCTGCTGGT GCTGGACCAC GGCCGCAAGA TCGCCGAGGG CCGCCCGCGC GAACTGATCG CCGGGCACCT GGAGAGCGAC GTGGTCGAGG TGTACGGCCA GGGCGCGCTG GCGCTGGCCG AAGACGCCGC GCTGCGCCCG CTCGCGGCGC GCGTGGAAGT GAGCGGCGAG ACGGTGTTCT TCTACACGCA GGATGCACGC CCGCTGCTCG CCGCGCTCGA CACGCATCCG CAGCTGCGCC GCCTGCACCG CCCCGCCAAC CTGGAGGACC TGTTCCTCAA GCTCACCGGC CGCCAGATCC GCGAGTGA
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Protein sequence | MATSSPLFEI AHLRKRYGGT AVVDDLSLSI APGECLGVIG PNGAGKTTTL RMCLGLTAPD EGSVRFHPPG GGAPLLMPRD ARAIKAQLGV VTQFDTLDPD FTCAENLHVF GRYFGLRGRT MDERVPRLLE FAALSHKAGA KPGELSGGMK RRLSLARALV NDPALLLLDE PTTGLDPQAR HLMWERLQQL LQQQGKSILL TTHFMDEAER LCTRLLVLDH GRKIAEGRPR ELIAGHLESD VVEVYGQGAL ALAEDAALRP LAARVEVSGE TVFFYTQDAR PLLAALDTHP QLRRLHRPAN LEDLFLKLTG RQIRE
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