Gene Aave_4259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4259 
Symbol 
ID4665777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4722759 
End bp4723706 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content72% 
IMG OID639825445 
ProductABC transporter-related protein 
Protein accessionYP_972573 
Protein GI120612895 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01288] ATP-binding ABC transporter family nodulation protein NodI 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.493495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAT CCTCCCCGCT TTTCGAGATC GCCCACCTGC GCAAGCGCTA CGGCGGCACC 
GCCGTGGTGG ACGACCTGTC GCTGTCCATC GCGCCGGGCG AATGCCTGGG CGTGATCGGG
CCCAACGGCG CGGGCAAGAC CACCACGCTG CGCATGTGCC TGGGCCTCAC GGCGCCCGAC
GAAGGCAGCG TGCGCTTCCA CCCGCCGGGC GGCGGCGCGC CGCTGCTCAT GCCGCGGGAC
GCGCGCGCCA TCAAGGCGCA GCTGGGCGTG GTGACGCAGT TCGACACTCT CGACCCGGAT
TTCACCTGCG CGGAGAACCT GCACGTGTTC GGCCGCTACT TCGGCCTGCG CGGACGGACG
ATGGACGAGC GCGTGCCGCG GCTGCTGGAG TTCGCCGCCC TCTCCCACAA GGCCGGTGCG
AAGCCGGGCG AACTCTCGGG CGGCATGAAG CGGCGCCTCT CGCTCGCGCG GGCGCTGGTG
AACGATCCCG CGCTGCTGCT GCTCGACGAG CCCACCACGG GCCTGGACCC GCAGGCCCGC
CACCTGATGT GGGAACGCCT GCAGCAGTTG CTGCAGCAGC AGGGCAAGTC GATCCTGCTC
ACCACCCACT TCATGGACGA GGCCGAGCGC CTGTGCACGC GGCTGCTGGT GCTGGACCAC
GGCCGCAAGA TCGCCGAGGG CCGCCCGCGC GAACTGATCG CCGGGCACCT GGAGAGCGAC
GTGGTCGAGG TGTACGGCCA GGGCGCGCTG GCGCTGGCCG AAGACGCCGC GCTGCGCCCG
CTCGCGGCGC GCGTGGAAGT GAGCGGCGAG ACGGTGTTCT TCTACACGCA GGATGCACGC
CCGCTGCTCG CCGCGCTCGA CACGCATCCG CAGCTGCGCC GCCTGCACCG CCCCGCCAAC
CTGGAGGACC TGTTCCTCAA GCTCACCGGC CGCCAGATCC GCGAGTGA
 
Protein sequence
MATSSPLFEI AHLRKRYGGT AVVDDLSLSI APGECLGVIG PNGAGKTTTL RMCLGLTAPD 
EGSVRFHPPG GGAPLLMPRD ARAIKAQLGV VTQFDTLDPD FTCAENLHVF GRYFGLRGRT
MDERVPRLLE FAALSHKAGA KPGELSGGMK RRLSLARALV NDPALLLLDE PTTGLDPQAR
HLMWERLQQL LQQQGKSILL TTHFMDEAER LCTRLLVLDH GRKIAEGRPR ELIAGHLESD
VVEVYGQGAL ALAEDAALRP LAARVEVSGE TVFFYTQDAR PLLAALDTHP QLRRLHRPAN
LEDLFLKLTG RQIRE