| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4250 |
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| Symbol | |
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| ID | 4666378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4707678 |
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| End bp | 4709486 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639825436 |
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| Product | PTS system, fructose subfamily, IIC subunit |
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| Protein accession | YP_972564 |
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| Protein GI | 120612886 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.401308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.782956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAC TCATCGCCAT CGCCGCGAGC CAGGCCGGCC CGGCGCACAG CTTCATGGTG
GCCGAGGCGC TGCGCGCCGC GGCCGAATCG CTCGGCCACC GCATCGCCGT GAGCGTACAC
AGCAGCCTGG GCACCCAGGG CGGCTTCAGC GACGGCGAAC TGGCGGGCGC CGCGGCGGCC
ATCATCGCCG CCGACATGCC CGTGGACCGC CAGGACCTGC TGGGCACGGC CGCGGCTCCC
GTGCACGAAG CCGCCCCGCA GGAGGTGCTG GCCGATGCGG AGCGCGTGGT GCGCGCCGCG
CTGGCCCGCG CGGGCGGTGC GCCTGCACGG GTCGCTGCTT CGCTGCCACC CGCCGCGCCC
GCTGCGGCTT CGCCCGCAAC CGCCGCGCCC CAGGACGGCC CCCTGCGCAT CGTCGCCATC
ACGTCCTGCC CCACGGGCGT GGCCCACACC TTCATGGCCG CCGAGGCGCT GGAGCAGGGC
GCGCGCGCCC TGGGCCATAC CATCAAGGTG GAGACGCAGG GCTCGGTGGG CGCGCAGAAC
GCGCTCACTG CCGGCGAGAT CGCCGAGGCC GACCTCGTGG TGATCGCGGC CGATACGCAG
GTCAACCGCG ACCGCTTCGC CGGCAAGCGC CTCTACGCCA CCTCCACCAA GGCCGCCATC
CACGATGCGG CGGCGGTCTT CGCCCAGGCG CGGGCGCAGG CCCAGGCGTG GGGCGCTTCC
GCATCGCCCG CCCCGGCGGC CGGCGGCTCG GCGGCGGCCC TGGCAACGGC TGGCAAGCGT
GAATCCTCCG GCGCCTACAA GCACCTGATG ACGGGCGTCT CCTTCATGCT GCCCTTCGTG
GTGGCGGGCG GCCTGCTGAT CGCGCTGGCC TTCGCGCTGG GCGGCATCTA CGTCTATGAC
GACGCCCACA AGGGCACGTT CGGCTGGGTG CTGTTCCAGG TCGGGGCCAA GGCGGGCTTC
GCGCTCATGC TGCCCGCGCT GGCGGGCTAC ATCGCCTACT CCATCGCCGA CCGGCCCGGC
ATCGCGCCCG GCATGATCGG CGGCATGCTG GCCGGCACCG TGGGAGCAGG CTTCCTGGGC
GCCATCGCGG CAGGCTTCAT CGCCGGCTAT GCGGTGCACT GGCTGAACCG CTTCATCCGC
CTGCCGCGCG GGCTGGACGG GCTCAAGCCC GTGCTGATCC TGCCGCTGCT GGGCGCGGCC
ATCGTCGGCG TGCTGATGAT GATGGTGATC GGCGCGCCCA TGGCCGCCGT GATGGGCGCG
CTGACGGACT GGCTCAAGGG CCTGCAGACC GGCAGCGCCG TGCTGCTGGG CGTGATCCTG
GGCGCCATGA TGGCCTTCGA CATGGGCGGG CCGGTGAACA AGGCGGCCTA CGTCTTCTCC
ACCACCCTGA TCGCCAGCGG CGTGGCCAAC CCCATGGCCG CCGCCATGGC CGCCGGCATG
ACGCCGCCGC TGGGCATCGC CCTGGCCTGC TGGCTGTTCA AGAACCGCTT CACCGCCGAA
GAGCGCGAAG CCTCCAAGGC CTCCGCCGTG CTGGGCCTGG CCTTCATCAC CGAAGGCGCC
ATTCCCTTCG TGGCGCGCGA TCCGCTGCGC GTGATCCCGG CCTGCGTGCT GGGCTCCGCG
GTGGCCGGGG GCCTCTCGAT GGCCTGGAAC ATCGGCCTGC AGGCCCCGCA CGGCGGCGTG
TTCGTGCTGG CCATTCCCAA CGCCGTGAAC CATGTGGTCC TGTATGCGGC CGCGATCCTG
GCCGGCACCG TGGTGACGGC CCTGGCGCTG GGCCTGTTCA AGAAAAAACT GCAGCCTTCC
GCCCGCTGA
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| Protein sequence | MAQLIAIAAS QAGPAHSFMV AEALRAAAES LGHRIAVSVH SSLGTQGGFS DGELAGAAAA
IIAADMPVDR QDLLGTAAAP VHEAAPQEVL ADAERVVRAA LARAGGAPAR VAASLPPAAP
AAASPATAAP QDGPLRIVAI TSCPTGVAHT FMAAEALEQG ARALGHTIKV ETQGSVGAQN
ALTAGEIAEA DLVVIAADTQ VNRDRFAGKR LYATSTKAAI HDAAAVFAQA RAQAQAWGAS
ASPAPAAGGS AAALATAGKR ESSGAYKHLM TGVSFMLPFV VAGGLLIALA FALGGIYVYD
DAHKGTFGWV LFQVGAKAGF ALMLPALAGY IAYSIADRPG IAPGMIGGML AGTVGAGFLG
AIAAGFIAGY AVHWLNRFIR LPRGLDGLKP VLILPLLGAA IVGVLMMMVI GAPMAAVMGA
LTDWLKGLQT GSAVLLGVIL GAMMAFDMGG PVNKAAYVFS TTLIASGVAN PMAAAMAAGM
TPPLGIALAC WLFKNRFTAE EREASKASAV LGLAFITEGA IPFVARDPLR VIPACVLGSA
VAGGLSMAWN IGLQAPHGGV FVLAIPNAVN HVVLYAAAIL AGTVVTALAL GLFKKKLQPS
AR
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