| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4245 |
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| Symbol | |
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| ID | 4667160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4702248 |
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| End bp | 4703681 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639825431 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_972559 |
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| Protein GI | 120612881 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.694527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCT CCCCCCCTTC CCCGGCTCCC CGGGCCGCCG CGGCGTCCGC GGGCTTCGAC
GCCCTCGGGC TTTCCCCCGA AGTGCTGGCC AACCTGCGCC AGCTCGGCTA TGAGCGCATG
ACGCCCATCC AGGCGGCCAG CCTGCCGCCC GCCCTGCTGG GCCGCGACCT GATCGCGCAG
GCCAGCACCG GCAGCGGCAA GACGGCCGCC TTCGGGCTGG CCCTGCTGGA GCGCCTCAAT
CCGCGCCGCT TCGCCGTGCA GGCGCTGGTG CTCTGCCCCA CGCGCGAACT GGCCGACCAG
GTGGCGGCCG AGATCCGCCG GCTGGCCCGC GCGCAGGAGA ACATCAAGGT CGTCACCCTG
TGCGGCGGCG TGCCGCTGCG CGGGCAGGCC GCGAGCCTGG AGCATGGCGC GCACGTCGTC
GTCGGCACGC CCGGCCGCGT GATGGACCAC CTGGAGCGCG GCACGCTCGA CCTGGGCGCG
CTGGCCACCT TCGTGCTGGA CGAGGCCGAC CGCATGCTCG ACATGGGCTT CTCCGAAGAC
ATCGCCCAGG TGGCGCGCCG CTGCCCGGAC ACCCGCCAGA CGCTGTTGTT CTCCGCCACC
TATCCCGAAG GCATCGAGCG GATCGCGCGC CAGTTCATGA AGGATCCACA GCGCATCGTG
GTGCAGGCCC AGCATGCCGA GGGCAAGATC GGGCAGCGCT GGTACGAAGT GCAGGAGCGC
GAGCGCCTGC ATGCCGTCTC GCAGCTGCTG AACCATTTCC GGCCGGAATC CGCCATCGCG
TTCTGCAATA CGAAGCAGCA GTGCCGCGAT CTCGTGGAGG TGCTGCGCGC GCAGGGATTC
AGCGCCCTGG CCCTGCACGG CGACCTGGAG CAGCGCGACC GCGACCAGGT GCTGGTGCAG
TTCGCCAACC GCAGCTGCAG CGTGCTGGTG GCCACCGACG TGGCCGCGCG CGGCATCGAC
ATCGCCGGTC TGCAGGCCGT CATCAACGTG GACGTGGCGC CCGACCCGGA GGTGCACATC
CACCGCATCG GCCGAACCGG CCGTGCCGAC GCGGAGGGCC TGGCGCTCAG CCTCGCGAGC
CTGCCGGAGA TGGGGCAGGT GGGCCGCATC GAGGTGCTGC AGGGCCGCCC GTCGGAGTGG
CACCCGCTCT CCGGCCTCAC GCCCGCGCCG GGCGGGCCGC TGCAGCCGCC CATGGCCACC
ATCCAGATCA TCGGCGGGCG CAAGGAGAAG ATCCGCGCGG GCGATGTGCT GGGCGCGCTC
ACCGGCGAGA TGGGTTTCAC GCGCGAGCAG GTGGGCAAGA TCAACGTGAA CGACTTCTCC
ACCTACGTGG CGGTCGAGCG CAGCGTGGCC CGGCAGGCCG CGCAGCGCCT CTCCTCCGGC
CGCGTGAAGG GCCGCAGCGT CAAGGCGCGG CTGGTCGAGG ACGGCGAGGG CTGA
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| Protein sequence | MQPSPPSPAP RAAAASAGFD ALGLSPEVLA NLRQLGYERM TPIQAASLPP ALLGRDLIAQ
ASTGSGKTAA FGLALLERLN PRRFAVQALV LCPTRELADQ VAAEIRRLAR AQENIKVVTL
CGGVPLRGQA ASLEHGAHVV VGTPGRVMDH LERGTLDLGA LATFVLDEAD RMLDMGFSED
IAQVARRCPD TRQTLLFSAT YPEGIERIAR QFMKDPQRIV VQAQHAEGKI GQRWYEVQER
ERLHAVSQLL NHFRPESAIA FCNTKQQCRD LVEVLRAQGF SALALHGDLE QRDRDQVLVQ
FANRSCSVLV ATDVAARGID IAGLQAVINV DVAPDPEVHI HRIGRTGRAD AEGLALSLAS
LPEMGQVGRI EVLQGRPSEW HPLSGLTPAP GGPLQPPMAT IQIIGGRKEK IRAGDVLGAL
TGEMGFTREQ VGKINVNDFS TYVAVERSVA RQAAQRLSSG RVKGRSVKAR LVEDGEG
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