Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4220 |
Symbol | |
ID | 4666155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4676758 |
End bp | 4678167 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639825406 |
Product | aminotransferase |
Protein accession | YP_972534 |
Protein GI | 120612856 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.240603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAC CTCTCTATTT CACCCTCCCG GCACCGCAGG ACATCGGCGG TCCCCTTGAA CCCACTCCTC AGCGCCGGTT CCAGCAGGGA GTGGAACTGA GGAACCAGGA GCGTCTGGAA TCGGAGGTGC GGTCCTACCC GCGGCGCTTT CCCATGGCAA TCCGCAGGGC CCAGGGAGCC ATCGTTGAAG ACACGCTGGG CCAGCGCTAT CTGGATTGCC TGGCCGGAGC CGGAGCACTG GCACTCGGGC ACAACCACCC CGAGGTGACA GGAGCGGTGG TGGCGGCGAT CCAGTCGGGC ATTCCCCAGC AGGCACTTGA CGTGGCGACA CCTTCCAAGG ACGCGCTCAT ACAGGAAATT ATGGGATTTC TTCCTGCCAG CTTCGCCCAG GACTCCTGCA TTCAGTTCTG CGGTCCGTCG GGATCGGACG CCGTGGAGGC TGCCATCAAA CTGGCGAAGC AATGCACGGG ACGCCACAAC ATCGCCGCGT TCCATGGCGC CTACCATGGC ATGACGAACG GTGCGCAGGC CCTGATGGGC AACCTGGGTG CGAAGCAGCG GCGCACCGGG CTGATGCCCG ATGTGCATTT CTTCCCATTT CCCTACGGCC TGCGCTGCAA GTTCGGCCTC GGCGGAGAGG CCGGTGAACG GGCATCGATC AGGTACATCG AATCCGTGCT GCACGACCAG GAAAGCGGTA TGGTCAAGCC CGCCGCCATG ATTCTGGAAC CCATTCAGGG CGAAGGAGGG GTTCTACCGG CCTCGGACTA TTGGTTGCGG GAGATCCGAC GCATCACATC CGAACTGGGT ATCGTCCTCG TCTTCGACGA AATCCAGTGC GGAGTAGCTC GCTCCGGACG CCACTTCGCT TTCGAACACG CAGGCGTGGA ACCGGACATC CTCGTGCTGT CGAAGGCTGT CGGGGGCGGG CTCCCCCTTT CGTGCCTGGT GTTCAAGAAG CGGTTCGACA ACTGGACCCC GGGGGAGCAC GCGGGCACCT TCCGGGGCAC CCAGTGGGCC ATGGTTGCCG GCACCAGAAC ATTGCAGATC ATCCAGCGCG ATGGCTTGGC CCTGAATGCG GACCGCATGG GAGCCAGCTT GAGCGGCAGG CTGGCAGCGC TACGGCAGGA CCATCCATGT ATTGCGGAAA TCCGCGGCAA GGGTTTGATG CTGGGCATTG AAATCGTTGA CCCGAAACGC GTGGATGCGC TGGGTCAACC GCTTGCCGAC GGGCAGCGCG CGGCCCGGAT TCAGGCCGCG GCCTTGCGGC ATGGCCTGAT GATAGAGAAG GGTGGACGGC ATGGCGCGGT CTTGCGCTTT CTCCCCCCCT TGAACATCAC GGATGATCAG ATCGATTTCG CGGCCCGGGC CTTCACACAC GCCATGCAGG CCACGGAGCA GGCACGGTGA
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Protein sequence | MNKPLYFTLP APQDIGGPLE PTPQRRFQQG VELRNQERLE SEVRSYPRRF PMAIRRAQGA IVEDTLGQRY LDCLAGAGAL ALGHNHPEVT GAVVAAIQSG IPQQALDVAT PSKDALIQEI MGFLPASFAQ DSCIQFCGPS GSDAVEAAIK LAKQCTGRHN IAAFHGAYHG MTNGAQALMG NLGAKQRRTG LMPDVHFFPF PYGLRCKFGL GGEAGERASI RYIESVLHDQ ESGMVKPAAM ILEPIQGEGG VLPASDYWLR EIRRITSELG IVLVFDEIQC GVARSGRHFA FEHAGVEPDI LVLSKAVGGG LPLSCLVFKK RFDNWTPGEH AGTFRGTQWA MVAGTRTLQI IQRDGLALNA DRMGASLSGR LAALRQDHPC IAEIRGKGLM LGIEIVDPKR VDALGQPLAD GQRAARIQAA ALRHGLMIEK GGRHGAVLRF LPPLNITDDQ IDFAARAFTH AMQATEQAR
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