| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4209 |
|---|
| Symbol | |
|---|
| ID | 4666551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4664386 |
|---|
| End bp | 4664841 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639825395 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_972523 |
|---|
| Protein GI | 120612845 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.558513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAT CCCTGCACAT CGTCTGCCCG CACTGCCACA CCACCAACCG CATCGCGGCC
GACCGGCTGG CCGCGCCGCC CGGCACGGTC GAGGCGGACT GCGGGCAGTG CCACCGGCCG
CTTTTCACGG GCGAGCCCGT GGCGCTCGAC GATGCCTCCT TCGGGCGCCA TACCGAACGC
AGCCACATTC CGGTGGTGGT GGATTTCTGG GCGCCATGGT GCGGTCCCTG CCGCACCATG
GCCCCGGCCT TCGCGCAGGC GGCCCGGGCG CTCGAGCCGG GCGTGCGGCT CGCCAAGCTC
GACACCGAGG CGCATCCCGC CATCGGCGCG CGCCTGGGCA TCCGCAGCAT CCCGACGATG
GTGATGTTCC GCCAGGGGCG GGAAGTCGCG CGCATCTCGG GGGCGATGGG CGCCGCCGAC
ATCGCGCGCT GGGTGCGGAC GGCCGGCGGC GCCTGA
|
|---|
| Protein sequence | MPESLHIVCP HCHTTNRIAA DRLAAPPGTV EADCGQCHRP LFTGEPVALD DASFGRHTER
SHIPVVVDFW APWCGPCRTM APAFAQAARA LEPGVRLAKL DTEAHPAIGA RLGIRSIPTM
VMFRQGREVA RISGAMGAAD IARWVRTAGG A
|
|---|
| |