| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4203 |
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| Symbol | |
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| ID | 4666736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4657140 |
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| End bp | 4659122 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639825389 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_972517 |
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| Protein GI | 120612839 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGC TCACGATTCT GACATCGCTC CTGGCTGCCG CGGCGTTCGC CTCCGCGTCG
GCGCCTGTCC AGGCCCAAAA CCGGGGCGAT GAGGCGCTGT TACAAATGCA GCAGGCCTAC
CGCAAGGGCG ACCGCGCGCG GCTCGCGCAG CTCCTGCCGG ACGTGCGCGG CCACGTGCTG
GAACCCTGGG GCGCCTACTG GGAACTGCGC GCCCGGCTCG ACCAGGCCAC GCCGCAGGAC
GTGTCGGCCT TCCTGCAGCG CTACGCCGGC ACCTACCAGG AAGACCGGCT GCGCAACGAC
TGGCTGCTGC TCGTCGGCCA GCGCCGCGAC TGGGCGCAGT TCAGCGAATT GCATGCGCTC
TACCGCATGA ACGACGACCG CGAAGTGCGC TGCTACGCCC TGCTCGTGGA CCAGATCAAG
GGCTCCGCGG CCCCCGGCGC GGCCGACGAG GTATTGCGCA ACTGGTATGG GTTGCGCGAG
GCGGACGACG GCTGCACGCA CGCCGCGGCC GAGTTCTTCT CCGACAAGCG CATCGCTGCG
CTGGACGTGT GGCGCAAGGC CCGGCTGGCG GCCGAGGCCA ATCGTGCGCG CGCCACGCGC
AATGCGGTCG GGATCGTCGC TCCCGAGGCG CTGCCGCTGC TGCGCGACGT GTTCGACGCG
CCCGCCAAGT TCCTCGCGAG CCGTGCCACG GCACCGGGCC GCATGCGGCA GGAACTGGTG
GTGCTGTCCC TCATCAAGAT GGCGATGTCG GACCCCGGCA CCGCGGCCCG CCTGCTGGAT
TCCAAATGGG GTCCGCAGCT CAGCCCGGAA GAGCGCAACT GGGTGTGGGG CGTGATCGGC
AAGCAGTCCG CCGTGGCGCT GTCGCCGGAC GCGCTGGGCT ATTTCGGCAA TGTCTCCAGG
GATGCCGACC TGACCGACGA CATGCTCGGC TGGAAGGTGC GCGCAGCCCT GCGCGCGGGC
CAGTGGAAGC AGGTGGCCCG CGCCATCGAC GCGATGAGCC CGGCGGGGCG GCAGGATCCC
GCATGGACCT ACTGGCGTGC GCGGGCCTGG CTGTCCAACC GCCCGGGCGA CGAAGACCGG
GCGAAGGCGC GCGAACTGCT CGAACGCATC GCGGGCCCGG GCGGCTTCTA CGAGCAGCTC
GCACTGGAGG AACTCGGCCA GCGCGTGGTC CCGCCCGCGC CGCCGCTGCC GCCCACGCCC
GAGGAAAAGG CCGCCGCGCG CGCGAACCCG GGCTTCGTGC GCAGCCTCTA CGCCATCGGC
CTGGGGCTGC GGCACGAAGG CGTGCGCGAA TGGAACTACA CCACCAACCT GCACTTGCCG
GGCGGCATGG GCGACCGGGA ACTGCTCGCC GCCGCCGATC TCGCCTGCCA GCGCGAGATC
TGGGACCGCT GCATCAACAC CAGCGAACGC ACCAAGTCGT TTGCCGACGT GGGCCAGCGC
TTCCCCATGC CATTCCGCAG TGCGGTCGTG GCGCGCGCTC AGTCCATCGG ACTGGACCCG
GCTTACGTCT ATGGTCTCAT CCGCCAGGAA AGCCGCTTCA TCATGGATGC CCGCTCGGGC
GTCGGCGCGT CGGGCCTCAT GCAGGTCATG CCGGCCACCG CGCGCTGGAC GGCCCGCAAG
ATCGGCATGG CGGATTTCAC GCCCGAGCAG ATCAACGACC GCGACACCAA CATCGCCATC
GGCACGGCCT ACCTCAAGCT CGCTCTCGAC GACTTCGACG GCTCCATGCC CATGGCTGCG
GCCGCCTACA ACGCCGGTCC CGGCCGGCCG CGCAACTGGC GCAACGGTCC TGTGCTGGAG
GCCGCGATCT GGGCCGAGAA CATCCCGTTC TCGGAAACAC GCGATTACGT CAAGAAGGTG
CTCTCCAACA CCACGATGTA TGCCGCGATC CTGACGGGCC AGCCACAGTC GCTCAAGGGC
CGGCTCGGCA ACGTGGGCCC GCGCGACGCG GCCACGCCGG ACCCGAGCCG CGAACTGCCC
TGA
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| Protein sequence | MQLLTILTSL LAAAAFASAS APVQAQNRGD EALLQMQQAY RKGDRARLAQ LLPDVRGHVL
EPWGAYWELR ARLDQATPQD VSAFLQRYAG TYQEDRLRND WLLLVGQRRD WAQFSELHAL
YRMNDDREVR CYALLVDQIK GSAAPGAADE VLRNWYGLRE ADDGCTHAAA EFFSDKRIAA
LDVWRKARLA AEANRARATR NAVGIVAPEA LPLLRDVFDA PAKFLASRAT APGRMRQELV
VLSLIKMAMS DPGTAARLLD SKWGPQLSPE ERNWVWGVIG KQSAVALSPD ALGYFGNVSR
DADLTDDMLG WKVRAALRAG QWKQVARAID AMSPAGRQDP AWTYWRARAW LSNRPGDEDR
AKARELLERI AGPGGFYEQL ALEELGQRVV PPAPPLPPTP EEKAAARANP GFVRSLYAIG
LGLRHEGVRE WNYTTNLHLP GGMGDRELLA AADLACQREI WDRCINTSER TKSFADVGQR
FPMPFRSAVV ARAQSIGLDP AYVYGLIRQE SRFIMDARSG VGASGLMQVM PATARWTARK
IGMADFTPEQ INDRDTNIAI GTAYLKLALD DFDGSMPMAA AAYNAGPGRP RNWRNGPVLE
AAIWAENIPF SETRDYVKKV LSNTTMYAAI LTGQPQSLKG RLGNVGPRDA ATPDPSRELP
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