| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4196 |
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| Symbol | |
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| ID | 4666949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4649748 |
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| End bp | 4650704 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639825382 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_972510 |
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| Protein GI | 120612832 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGA ACCGCCGCAC CCTCCAGACC GCCGCCGTCC TGGCCCTCGC CGGTGGCCTG
TTCGCGCAGC CTGCCTTCGC GCAGGACAAG CCCAAGGTCG CGCTGGTGAT GAAGTCGCTC
GCCAACGAGT TCTTCCGCAC CATGGAGGAC GGGGCCAAGG CGCACCAGAA GGCGCATGCC
TCGGAATACA CGCTGGTGGC CAACGGCATC AAGAACGAGA CCGACACTGC CGCGCAGATC
AAGATGATCG AGCAGGCCGT GGCACAGAAG GTGAACGCCA TCGTGCTCGC GCCCGCCGAT
TCCAAGGCCC TGGTGCCGGC CGTGAAGGCC GCGGTGGACA AGGGCATCCT CGTGGTCAAC
ATCGACAACC GCCTGGATGC CAACGCGCTC AAGGAAAAGA GCCTGAACGT GCCCTTCGTC
GGCCCGGACA ACCGTGCCGG CGCCAAGCTG GTGGGCGACT ACCTGGCCAA GCAGCTGAAG
GCCGGCGACA AGGTCGGCAT CATCGAGGGC GTTTCCACCA CGTTCAACGC GCAGCAGCGC
ACGCTGGGCT TCCAGGACGC GATGAAGGCC GCCAACATCA ACGTGGTCGG CGTGCAGTCC
GGCCAGTGGG AAATCGAGAA GGGCAACACC GTGGCCGCCG GCATGCTGCG CGAGCACCCG
GACCTGGTGG CGCTGCTGGC TGGCAACGAC AGCATGGCGC TGGGCGCCGT GGCCGCTGTG
AGGGCCGCCG GCAAGGCCGG CAAGGTGCAG GTGGTGGGCT ACGACAACAT CAACGCCATC
AAGCCCATGC TGGCCGACGG CCGCGTGCTG GCCACGGCCG ACCAGTACGC CGCCAAGCAG
GCGGTGTTCG GCATCGAGAT GGCGCTGAAG GCCCTCGCCG CCAAGACGCC GCAGGCCCAG
CTGCCAGCCG AGGTCAAGAC CGAAGTGGTG CTGGTGACCA AGGGCACCGG CAAGTAA
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| Protein sequence | MTLNRRTLQT AAVLALAGGL FAQPAFAQDK PKVALVMKSL ANEFFRTMED GAKAHQKAHA
SEYTLVANGI KNETDTAAQI KMIEQAVAQK VNAIVLAPAD SKALVPAVKA AVDKGILVVN
IDNRLDANAL KEKSLNVPFV GPDNRAGAKL VGDYLAKQLK AGDKVGIIEG VSTTFNAQQR
TLGFQDAMKA ANINVVGVQS GQWEIEKGNT VAAGMLREHP DLVALLAGND SMALGAVAAV
RAAGKAGKVQ VVGYDNINAI KPMLADGRVL ATADQYAAKQ AVFGIEMALK ALAAKTPQAQ
LPAEVKTEVV LVTKGTGK
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