Gene Aave_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4192 
Symbol 
ID4666823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4644033 
End bp4645028 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content68% 
IMG OID639825378 
Producthypothetical protein 
Protein accessionYP_972506 
Protein GI120612828 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA GAGAGAGAGA GACACCCATG TTGCGCCGCA GTTACCTTTT GGCCGTCCTG 
CTGGCGGGAG GGGCCTGGAG CGTCCAGGCC CAGAACGCCT CGGCGCCGCT GACCATCGTC
GTTCCGTACC CCGCGGGCGG GCCCGTGGAC GCGTCCGCCC GCATCGTGGC GGAGGGCGTG
CGCGGCACAC TCGGCCCCGT GGAGGTGCAG AACAAGCCGG GCGCCGGCGG CACGACGGGC
GCGGCGCTGG TGGCCAAGGC TCCGAAGGAC GCCAACTGGC TGGTGATGGG CGCGGTCGCC
ACGCATGCGG TGAATCCGTG GCTGCAGGCA GGCTTCCCGT ACGACCCGCT GAAGGATTTC
AAGCCGATCG CGCTCGTGGC GCGCACGCCC AACGTGCTCG TCATGGAAGC GGAGCGTGCC
AAGTCGCTGG GCATCCGCAC GACCGGGGAG CTGGTGCAGT ACCTCAAGAA GAACCCCGAC
CAGTTGCGCT ACGGATCGGG CGGCAACGGC AGCATCGGCC ACATCGCGGC CGAGATGTTC
AAGTCGCTCA CCAATACGCG CGTGGCGCAC GTGCCCTTCC AGGGATCCGC GCCCGCGCTC
AAAGCCCTGC AGTCGGGAGA GGTCGCGTTC TTGTTCGACA ACCTCGCCTC GTCGCTGCCG
CTGGTCAAGG CCGGCAAGCT CAAGGCCCTC GGCGTGACCA GCCTGGGCCG GGACGACGAG
CTGCCGGACG TGCGCAGCAT CAACGACGAG GTGCCGGGAT TCAACGTGGT GACGTGGTTC
GGGCTGTTCG CCCCGGCCTC GCTGCCCGAT GAGGATGCCC GCCGCTATGC GGCGGCCATC
ACCGCGGCGA TGAAGGAGCC CGACAGTGCG CAGAAGCTCA AGGAGATGGG CATCGACGCC
GAGGACCTGA CGCTGGAAAC CTTCGGCCAG TTCGTGCGCG CGGAGCACGC GAAGTACGGC
TTCCTGATCA AGGCCGCGAA GATCAAGATG GACTGA
 
Protein sequence
MSTRERETPM LRRSYLLAVL LAGGAWSVQA QNASAPLTIV VPYPAGGPVD ASARIVAEGV 
RGTLGPVEVQ NKPGAGGTTG AALVAKAPKD ANWLVMGAVA THAVNPWLQA GFPYDPLKDF
KPIALVARTP NVLVMEAERA KSLGIRTTGE LVQYLKKNPD QLRYGSGGNG SIGHIAAEMF
KSLTNTRVAH VPFQGSAPAL KALQSGEVAF LFDNLASSLP LVKAGKLKAL GVTSLGRDDE
LPDVRSINDE VPGFNVVTWF GLFAPASLPD EDARRYAAAI TAAMKEPDSA QKLKEMGIDA
EDLTLETFGQ FVRAEHAKYG FLIKAAKIKM D