Gene Aave_4166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4166 
Symbol 
ID4667777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4619004 
End bp4620089 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content66% 
IMG OID639825353 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_972481 
Protein GI120612803 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.167438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0625555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGG TCACCGGCGG CGCGGGTTTC ATCGGCGCCA ACTTCGTCCT CGACTGGCTG 
GCCTGCGGCG ATGAGCCCGT CGTCAACCTC GACAAGCTCA CCTACGCAGG CAATCTGCAG
AACCTCGCTT CGCTGCAAGG CGATGCGCGC CACCTGTTCG TCCAGGGCGA CATCGGCGAC
CGGGAGCTGC TCACCCGGCT GCTGGCCGGG CACCGGCCGC GGGCCGTCGT GAATTTCGCG
GCCGAATCGC ATGTGGACCG TTCCATCCAT GGCCCGGAAG ACTTCATCCA GACCAACGTG
GTCGGCACCT TCCGCCTGCT CGAAGCCGTC CGCGAGTACT GGCAGTCCCT GCCCGGGGAC
GAGCGCGCCG CGTTCCGGTT CCTGCACGTC TCTACCGACG AGGTTTACGG AACCCTGGCG
CCCGAGGCCC CTGCCTTCGC CGAAACCCAT CCCTACGAGC CCAACAGCCC GTACTCCGCC
AGCAAGGCCG CCAGCGACCA CCTCGTCCGG GCCTGGCACC ACACCTACGG CCTGCCGGTG
CTGACCACCA ACTGCAGCAA CAACTACGGC CCCTTCCACT TTCCCGAGAA GCTGATCCCC
CTGATGATCG TCAACGCGCT GGCCGGCAAG CCGCTGCCCG TGTATGGCGA CGGCATGCAG
ATCCGCGACT GGCTCTATGT GCGCGACCAC TGCAGCGCCA TCCGCCGCGT GCTGCAGGCC
GGCCAGCCCG GCGAGACCTA CAACGTCGGT GGCTGGAACG AAAAGCCCAA CATCGAAATC
GTGAAGACCA TCTGCACTCT GCTCGACGAA CTGCGTCCGC GTGCCGATGG CGAGCGCTAT
GAAAGCCAGA TCGCCTACGT GAAGGACCGC CCGGGCCACG ACCGCCGCTA TGCCATCGAT
GCCCGCAAGA TCGAGCGCGA ACTCGGATGG AAGCCCGCCG AGACCTTCGA GACCGGCATC
CGCAAGACCG TGGAGTGGTA CCTCGCGCAT GGCGAATGGG TGGATGCCGT GACCAGCGGC
GCCTACCGCG AGTGGATCGA CCGCCAGTAC CGCAAGCCCG CCGTGCAGGA CGCCGCCACC
GCATGA
 
Protein sequence
MILVTGGAGF IGANFVLDWL ACGDEPVVNL DKLTYAGNLQ NLASLQGDAR HLFVQGDIGD 
RELLTRLLAG HRPRAVVNFA AESHVDRSIH GPEDFIQTNV VGTFRLLEAV REYWQSLPGD
ERAAFRFLHV STDEVYGTLA PEAPAFAETH PYEPNSPYSA SKAASDHLVR AWHHTYGLPV
LTTNCSNNYG PFHFPEKLIP LMIVNALAGK PLPVYGDGMQ IRDWLYVRDH CSAIRRVLQA
GQPGETYNVG GWNEKPNIEI VKTICTLLDE LRPRADGERY ESQIAYVKDR PGHDRRYAID
ARKIERELGW KPAETFETGI RKTVEWYLAH GEWVDAVTSG AYREWIDRQY RKPAVQDAAT
A