| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4158 |
|---|
| Symbol | |
|---|
| ID | 4668577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4611044 |
|---|
| End bp | 4611499 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639825345 |
|---|
| Product | general secretion pathway protein G |
|---|
| Protein accession | YP_972473 |
|---|
| Protein GI | 120612795 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000753103 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCACA TCCTTGCCCG CCGCTCCTGT GGCACGCCCA TGCAACGCAA ATCCTCGCGC
GGCTTCACCC TCATCGAACT GCTGGTCGTG CTGGCCATCC TGACGCTGCT GGCAGGCCTG
GTCGGCCCTC GCGTGCTGGG CCAGCTCGGC GGCGCCAAGG CCAAGACGGC CGGCGTGCAG
ATCGCCGACC TGGACAAGTC GCTGGAGCTC TTCAAGCTCG ACGTCGGCCG CTATCCCACC
ACGGAAGAAG GCCTGAATGC CCTCGTCAAT CGCCCCGGTT CCGTGAACGG ATGGGCCGGT
CCCTACCTCA AGGGCGGCGT TCCGACGGAC CCGTGGGGCC ATCCGTACCG CTACGCCAAT
CCCGGTCCCA ACGGCGGCAT CGAGATCCTC TCGCTGGGCT CGGACGGCGC ACCGGGCGGT
GAAGGCGAAG CGGCCGACAT CCGCAACAAG CCCTGA
|
|---|
| Protein sequence | MAHILARRSC GTPMQRKSSR GFTLIELLVV LAILTLLAGL VGPRVLGQLG GAKAKTAGVQ
IADLDKSLEL FKLDVGRYPT TEEGLNALVN RPGSVNGWAG PYLKGGVPTD PWGHPYRYAN
PGPNGGIEIL SLGSDGAPGG EGEAADIRNK P
|
|---|
| |