Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4136 |
Symbol | slmA |
ID | 4669304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4586158 |
End bp | 4586832 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639825323 |
Product | nucleoid occlusion protein |
Protein accession | YP_972451 |
Protein GI | 120612773 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.925695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000191569 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGAAT CCTTTTCCCA TCCCAACAAC GACGGCGCGG AAGCCGGCGA TGCGGCACCT GCGGCACCTG CCCGCCGGCG CCCCAAGCCG GGTGAGCGGC GGGTGCAGAT CCTGCAGACT CTGGCGGCCA TGCTGGAGCA GCCCGGCGGC GAGCGGATCA CGACGGCTGC CCTGGCTGCG CGGCTGGAGG TGAGCGAGGC GGCCCTGTAC CGGCACTTCG CCAGCAAGGC GCAGATGTTC GAAGGCCTCA TCGAATTCAT CGAGCAATCG GTCTTCGCGC TCGTCGCCCA GATCGTGGAG CGCGACATGC CGGATGCTCC CCATGCCACG GAAGGGACTC GCCGCGCCGC CCGCGTGGTG GCCATGGTCC TGCAGTTCGG CGAGCGCAAT CCCGGCATGG TGCGCGTGAT GGTGGGCGAT GCGCTCGTCT TCGAACACGA GCGGCTGCAG CAGCGCATGG GCCAGTTCTT CGACCGGATC GAATCCACGC TGCGCCAGTG CCTGCGGGGG GCCGCCGAAG CGGCCGGCTC CGCCACCCCG ACGGTCGATG CGCATGTGCG CGCGGCCGTG CTGTGCGACC TCCTGCGCGG CAGGCTGCAG CGCTATGCGC GCAGCGGGCT GCGCCGCCCG CCGACCGAGC ACCTCGACGC CACGCTCGCA TTGCTGCTGC ACTGA
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Protein sequence | MAESFSHPNN DGAEAGDAAP AAPARRRPKP GERRVQILQT LAAMLEQPGG ERITTAALAA RLEVSEAALY RHFASKAQMF EGLIEFIEQS VFALVAQIVE RDMPDAPHAT EGTRRAARVV AMVLQFGERN PGMVRVMVGD ALVFEHERLQ QRMGQFFDRI ESTLRQCLRG AAEAAGSATP TVDAHVRAAV LCDLLRGRLQ RYARSGLRRP PTEHLDATLA LLLH
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