Gene Aave_4136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4136 
SymbolslmA 
ID4669304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4586158 
End bp4586832 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID639825323 
Productnucleoid occlusion protein 
Protein accessionYP_972451 
Protein GI120612773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.925695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000191569 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGAAT CCTTTTCCCA TCCCAACAAC GACGGCGCGG AAGCCGGCGA TGCGGCACCT 
GCGGCACCTG CCCGCCGGCG CCCCAAGCCG GGTGAGCGGC GGGTGCAGAT CCTGCAGACT
CTGGCGGCCA TGCTGGAGCA GCCCGGCGGC GAGCGGATCA CGACGGCTGC CCTGGCTGCG
CGGCTGGAGG TGAGCGAGGC GGCCCTGTAC CGGCACTTCG CCAGCAAGGC GCAGATGTTC
GAAGGCCTCA TCGAATTCAT CGAGCAATCG GTCTTCGCGC TCGTCGCCCA GATCGTGGAG
CGCGACATGC CGGATGCTCC CCATGCCACG GAAGGGACTC GCCGCGCCGC CCGCGTGGTG
GCCATGGTCC TGCAGTTCGG CGAGCGCAAT CCCGGCATGG TGCGCGTGAT GGTGGGCGAT
GCGCTCGTCT TCGAACACGA GCGGCTGCAG CAGCGCATGG GCCAGTTCTT CGACCGGATC
GAATCCACGC TGCGCCAGTG CCTGCGGGGG GCCGCCGAAG CGGCCGGCTC CGCCACCCCG
ACGGTCGATG CGCATGTGCG CGCGGCCGTG CTGTGCGACC TCCTGCGCGG CAGGCTGCAG
CGCTATGCGC GCAGCGGGCT GCGCCGCCCG CCGACCGAGC ACCTCGACGC CACGCTCGCA
TTGCTGCTGC ACTGA
 
Protein sequence
MAESFSHPNN DGAEAGDAAP AAPARRRPKP GERRVQILQT LAAMLEQPGG ERITTAALAA 
RLEVSEAALY RHFASKAQMF EGLIEFIEQS VFALVAQIVE RDMPDAPHAT EGTRRAARVV
AMVLQFGERN PGMVRVMVGD ALVFEHERLQ QRMGQFFDRI ESTLRQCLRG AAEAAGSATP
TVDAHVRAAV LCDLLRGRLQ RYARSGLRRP PTEHLDATLA LLLH