Gene Aave_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4117 
Symbol 
ID4668976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4574248 
End bp4574571 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content65% 
IMG OID639825304 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_972432 
Protein GI120612754 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000145771 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAAGA CAAGGCCGCC GTATCCGGCG GAGTTCCGAG AGCAGATAGT GGAGTTGGTG 
CGAGCTGGGA GAACCCCAGC AGAGCTGGCT CGCGAGTTTG ACGTGACCGC GCAGACCATT
GCCAACTGGG TGGGTGCCGC TGGTGGTCAA GCGTCGCGAA GCCAGGCGAC GGCAGGTGCG
CTCACCGGGA GCGAACGCGA GGAGCTGGCC AGGCTGCGCC GGCAGTTGCG GCAAGTGCAG
ATGGAGCGCG ACATCCTGGC AAAGGCTACG GCCTGGTTCG CCGCCAAGAG CGACAAGACG
TTCACGCCGT CTTCGAACTC GTGA
 
Protein sequence
MGKTRPPYPA EFREQIVELV RAGRTPAELA REFDVTAQTI ANWVGAAGGQ ASRSQATAGA 
LTGSEREELA RLRRQLRQVQ MERDILAKAT AWFAAKSDKT FTPSSNS