Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4115 |
Symbol | |
ID | 4668104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4573077 |
End bp | 4573823 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639825302 |
Product | putative phage repressor |
Protein accession | YP_972430 |
Protein GI | 120612752 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.396113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000211881 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGCTGCAT GTTTTAATGT GTCCATGGAC ACACTAAAAA GTGCAGCATC ACACTCTCCC GATGGGATGC GGGATACCTA CGCGTCGGCT CTGGGGGACC GCATTCGCAG ATGCCGCGGC AACCTGACAC GGGAGGAGTT CGCACGTCGG CTGGAGCTGC ACATCAACAC CGTCGGCAAG TTCGAGCGGG GGCTCACAGT GCCGGATGCA TTCGTGCTCT TGCGTATGGC CGAGGTGGGC TCGTGCCAAG TCCAATGGCT GTTGACGGGT GAGGAGCCCA CGCCCAGCGT GCCAAAGAGC ATCCGTGCCA TTGAAGTGGG TAGCTATGTG TTCGTCCCGC ACTTCGACGT CCAGCTTTCC GCCGGCCATG GCGTGTTTGC TGATGTCGAG ACAGTGATCG CCATGAGGCC GTTCGACGTC AAATTCGTCC GTCAGGAGCT GGGCATCTCA CATGACGATC TCGCGCTGGT GTCTGTGGTT GGCAACTCGA TGGAGCCGTA CCTCAGATCA CGCGACACGA CCCTGCTAGA TCGGCGGGCC AACGATGTGG GCGCAGAAGG CATCCACGCG ATTCGGCTCG ACGGCGCCCT CATGCTGAAG TTCGTGCAGC GGTTGCCTGG CAAGGTCTTG CGTGTGAGCA GCGCAAACCA GGACTACGCA CCATTTGAAG TCACGGGCAA CGAGGAGGCC GAACGAGACT TTGCAGTGTT GGGTCGTGTC CGGTGGGGTG GCGTGACCTT CAACTAA
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Protein sequence | MAACFNVSMD TLKSAASHSP DGMRDTYASA LGDRIRRCRG NLTREEFARR LELHINTVGK FERGLTVPDA FVLLRMAEVG SCQVQWLLTG EEPTPSVPKS IRAIEVGSYV FVPHFDVQLS AGHGVFADVE TVIAMRPFDV KFVRQELGIS HDDLALVSVV GNSMEPYLRS RDTTLLDRRA NDVGAEGIHA IRLDGALMLK FVQRLPGKVL RVSSANQDYA PFEVTGNEEA ERDFAVLGRV RWGGVTFN
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