Gene Aave_4115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4115 
Symbol 
ID4668104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4573077 
End bp4573823 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID639825302 
Productputative phage repressor 
Protein accessionYP_972430 
Protein GI120612752 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.396113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000211881 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCTGCAT GTTTTAATGT GTCCATGGAC ACACTAAAAA GTGCAGCATC ACACTCTCCC 
GATGGGATGC GGGATACCTA CGCGTCGGCT CTGGGGGACC GCATTCGCAG ATGCCGCGGC
AACCTGACAC GGGAGGAGTT CGCACGTCGG CTGGAGCTGC ACATCAACAC CGTCGGCAAG
TTCGAGCGGG GGCTCACAGT GCCGGATGCA TTCGTGCTCT TGCGTATGGC CGAGGTGGGC
TCGTGCCAAG TCCAATGGCT GTTGACGGGT GAGGAGCCCA CGCCCAGCGT GCCAAAGAGC
ATCCGTGCCA TTGAAGTGGG TAGCTATGTG TTCGTCCCGC ACTTCGACGT CCAGCTTTCC
GCCGGCCATG GCGTGTTTGC TGATGTCGAG ACAGTGATCG CCATGAGGCC GTTCGACGTC
AAATTCGTCC GTCAGGAGCT GGGCATCTCA CATGACGATC TCGCGCTGGT GTCTGTGGTT
GGCAACTCGA TGGAGCCGTA CCTCAGATCA CGCGACACGA CCCTGCTAGA TCGGCGGGCC
AACGATGTGG GCGCAGAAGG CATCCACGCG ATTCGGCTCG ACGGCGCCCT CATGCTGAAG
TTCGTGCAGC GGTTGCCTGG CAAGGTCTTG CGTGTGAGCA GCGCAAACCA GGACTACGCA
CCATTTGAAG TCACGGGCAA CGAGGAGGCC GAACGAGACT TTGCAGTGTT GGGTCGTGTC
CGGTGGGGTG GCGTGACCTT CAACTAA
 
Protein sequence
MAACFNVSMD TLKSAASHSP DGMRDTYASA LGDRIRRCRG NLTREEFARR LELHINTVGK 
FERGLTVPDA FVLLRMAEVG SCQVQWLLTG EEPTPSVPKS IRAIEVGSYV FVPHFDVQLS
AGHGVFADVE TVIAMRPFDV KFVRQELGIS HDDLALVSVV GNSMEPYLRS RDTTLLDRRA
NDVGAEGIHA IRLDGALMLK FVQRLPGKVL RVSSANQDYA PFEVTGNEEA ERDFAVLGRV
RWGGVTFN