Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4113 |
Symbol | |
ID | 4668382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4571690 |
End bp | 4572301 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639825300 |
Product | prophage LambdaSo, lysozyme, putative |
Protein accession | YP_972428 |
Protein GI | 120612750 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000019692 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCATTCCC GCTCTCCTCG TCGCCTTTTT GGCCGCATTT CTGGCCGCCA GCTCGCAGCC GTGCTCACGC TATCCAGCGC TGGCCTGCTC GGCATCGTCA CGCACGAGAG CTACACAGAA AAAGCCATCG TCCCCACGCA GGGAGACCGG TCCACCGTGG GGTTCGGTTC GACGTTCCAC GAAGATGGCT CCCCGGTGAA ACCGGGCGAT ACGACTACGC CCGTTCGCGC CCTCATCAAA GCGCAGGCCC ACATCAGCCG AGAGGAGCAG GCTTTCCGCG CATCGCTGCC GGACGTGGCT CTCTACCAGG CCGAATACGA CCTCTACATG GACTGGGTCT ACCAGTACGG CTCCGCGGCG TGGCGCGCGT CGGGCATGCG CCGCGAGCTG CTCGCCGGCA ACTACGTGCA GGCCTGCGAC GAAATGCTCG CGTACCGCAA GCTCACCAGC TCGCGCAAGG AAGGCCCCGG CTGGGTCGTG AGCAAGCAGG ACGCGCAGGG CCGTCCGCTG CGCTGGGAAT TCGACTGCGC AACCCCCGGC AACAAGGTGT GCCGCGGTGT CTGGACGCGC CAGCTCGAGC GCCACAAGAA CTGCATGGAG GCCCAGCAAT GA
|
Protein sequence | MHSRSPRRLF GRISGRQLAA VLTLSSAGLL GIVTHESYTE KAIVPTQGDR STVGFGSTFH EDGSPVKPGD TTTPVRALIK AQAHISREEQ AFRASLPDVA LYQAEYDLYM DWVYQYGSAA WRASGMRREL LAGNYVQACD EMLAYRKLTS SRKEGPGWVV SKQDAQGRPL RWEFDCATPG NKVCRGVWTR QLERHKNCME AQQ
|
| |