Gene Aave_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4108 
Symbol 
ID4668054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4565768 
End bp4566559 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID639825295 
ProductD12 class N6 adenine-specific DNA methyltransferase 
Protein accessionYP_972423 
Protein GI120612745 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.596125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000213835 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATTCC CTATCGTCCC GTGGATCGGC GGCAAACGCC GCCTGGTAGA CCTCCTCCTG 
AGCCGTTTCC CGGCGCACAA GTGCTACGTC GAAGTCTTCG CGGGCGGCGC TGCGGTGTTC
TTCGCGCGCA ACCCCGCAGA CGTCGAGGTG CTCAACGACG TCAACGGCGA CCTAGTCAAT
CTCTACCGAG TGGTGACACA CCACCTGGAG GAGTTCGTGC GGCAGTTCAA ATGGGCCTTG
ACCTCGCGTC AGGTGTTCCG GTGGCTGCAG GAAACGCGGC CCGAGACGCT GACCGACGTG
CAGCGTGCCG CGCGGTTTTT CTACCTGCAG CAGCAGTCGT TCGGGGGCAA GGTGGCGGGC
CAGACCTTCG GCACCGCCAC CACGGCGCCG GCCATCAACC TGCTGCGGAT CGAGGAGTCG
CTGTCTGCTG CGCATCTGCG CCTGGCGGGC GGCACCTACA TCGAGCAGCT CGACTGGGCC
GAGTGCGTCG ACCGCTACGA CCGGCCTCAC AGCCTTTTCT ACTTGGACCC CCCGTACTGG
GAAACGGAAG GGTATGGCGT GCCCTTCGAG TGGGCGCAGT ATGAGCTGAT GGCCGCCAAG
CTCAAGGCGA TCCAGGGCAA GGCCATCGTC AGCATCAACG ATCACCCGGC GATCCGCGAG
TGCTTCGCGG GGTACGCGAT GGAGGCGCTG ACCCTCGACT ACACCGTGGG AGGCGGCGCC
AACCGCGTCG AGCGCGGTGA ACTTGTCATC TACAACTGGG ACTACCAGGC CGAGCCTGCC
GGGCTCTTTT AA
 
Protein sequence
MAFPIVPWIG GKRRLVDLLL SRFPAHKCYV EVFAGGAAVF FARNPADVEV LNDVNGDLVN 
LYRVVTHHLE EFVRQFKWAL TSRQVFRWLQ ETRPETLTDV QRAARFFYLQ QQSFGGKVAG
QTFGTATTAP AINLLRIEES LSAAHLRLAG GTYIEQLDWA ECVDRYDRPH SLFYLDPPYW
ETEGYGVPFE WAQYELMAAK LKAIQGKAIV SINDHPAIRE CFAGYAMEAL TLDYTVGGGA
NRVERGELVI YNWDYQAEPA GLF