Gene Aave_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4088 
Symbol 
ID4669562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4541191 
End bp4541625 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID639825275 
Producthypothetical protein 
Protein accessionYP_972403 
Protein GI120612725 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCG CTTTGTTGGC TATTGCCTTG GCAGCCGCCG CGCTGCCCTC CTGGGCCCAG 
ATGTCCCCGG TGGGGACATG GCGCAGCATC GATGACAAGA CTGGCGAGGC GAAGGCCGAG
ATCCGCATCA CCGAGGCGGA TGGCGTGCTG TCGGGCCGCA TCGAAAAGTC GCTCAAGAAA
GACACCCAGC CCGGCGCCAC GTGCCAGGAA TGCACCGATG ACCGCAAGGG CCAGCCCATC
GCCGGGCTGG AGATCATCCG CGGCGGCAAG AAGGCCGAAG GCAAGGACCT GTGGGAAGGG
GGCAAGATCC TCGACCCCGA GAATGGCAAG GAATACCGTG CCAGCTTCAC GCCCATCGAC
GGCGGCGCCA GGCTGGAAGT GCGCGGCTAC CTGGGGCCCT TCTGGCGCAC GCAGGTCTGG
CAGCGCGTGC AGTAA
 
Protein sequence
MRTALLAIAL AAAALPSWAQ MSPVGTWRSI DDKTGEAKAE IRITEADGVL SGRIEKSLKK 
DTQPGATCQE CTDDRKGQPI AGLEIIRGGK KAEGKDLWEG GKILDPENGK EYRASFTPID
GGARLEVRGY LGPFWRTQVW QRVQ