Gene Aave_4081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4081 
Symbol 
ID4666565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4533267 
End bp4533827 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content67% 
IMG OID639825268 
Producthypothetical protein 
Protein accessionYP_972396 
Protein GI120612718 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGC AAAACCCCTT CTTCGGCAAG CGTGAACCCG AGTCCTTCCA GCCCCGCCAG 
CCCACCTCGA TGCTCGGCGG TTCCGGCAGC GCGGTGAACG GCGCCACGTC CACCACCCCC
ACCGCACAGC CTGCGGTCCA GAAGCCCGCG GCCAGCGCCG CGTCGGAAGG GGCGGGCAGC
AAGCTCACCG TCGGCCCGAA CATCAAGCTC AAGGGCGTGG AGATCACCGA CTGCGACACG
CTCGTCGTCG AAGGAACGGT GGAGGCCACC ATGGACTCTC GCGTGATCCA GATCGCGGAA
CAGGGCGCCT TTCGGGGCTC GGCCGAGATC GACATCGCCG AAATCCACGG GGAGTTCGAC
GGCACGCTCA CCGTCCGGCA GAAGCTCGTC ATCTACAGCA CCGGCAAGGT CAACGGCAAG
ATCCGCTACG GCAAGGTGGT GATCGAGGAG GGTGGACAGC TGGCCGGCGA GATCGAGGCC
GGAACGGTCG GTTCGGTGCG TTCCCAGAAC CATTCCGCTG CGAATGTCTC CCGCGGCGAG
GCGCAGCCGC TGGCTGCCTG A
 
Protein sequence
MAVQNPFFGK REPESFQPRQ PTSMLGGSGS AVNGATSTTP TAQPAVQKPA ASAASEGAGS 
KLTVGPNIKL KGVEITDCDT LVVEGTVEAT MDSRVIQIAE QGAFRGSAEI DIAEIHGEFD
GTLTVRQKLV IYSTGKVNGK IRYGKVVIEE GGQLAGEIEA GTVGSVRSQN HSAANVSRGE
AQPLAA