| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4078 |
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| Symbol | |
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| ID | 4667044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4529785 |
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| End bp | 4530813 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639825265 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_972393 |
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| Protein GI | 120612715 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.779727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGC GCACCTTCCT TGCCACCGCC GTGGCCGCCG CGGCCGCACT CGCGTTCAGT
GCCGCACCGG CCGCCGCGCA GAACTACAAG AGCGAATACC GCATGTCGCT GGTGGTGGGC
ACCGCCTTCC CCTGGGGCAA GGGTGGCGAA CTCTGGGCGA ACAAGGTGCG CGAGCGCACG
CAGGGTCGCA TCAACATCAA GCTCTATCCG GGCGTCTCGC TCATCCAGGG TGACCAGACC
CGCGAGTTCA GCGCGCTGCG ACAGGGCGTG ATCGACATGG CCGTGGGCTC CACCATCAAC
TGGTCGCCGC AGGTCAAGGC GCTCAACCTC TTCTCCCTGC CCTTCCTCTT CCCCGACTAC
GCCTCGGTGG ACGTGGTCAC GCAGGGCGAA GTCGGCAAGA GCATCTTCCA GACCCTCGAA
AAAGCCGGCG TGGTGCCGCT CGCCTGGGGC GAGAACGGCT ACCGTGAGAT CTCCAACTCC
AAGCGGCCCA TCAAGACTCC CGCCGACCTC AAGGGGTTGA AGGTCCGCGT GGTCGGCTCG
CCGCTGTTCC TCGACACCTT CACGGCGCTG GGAGCCAACC CCACCCAGAT GAGCTGGGCC
GACGCGCAAC CCGCCATGGC CAGCGGCGCC GTGGACGGCC AGGAAAACCC CTTGTCCATC
TACCTGGCCG CCAAGCTCTA CACCGTGGCC CAGAAACATG TGACCCTGTG GGGTTACATG
AACGATCCGC TCATCTTCGT GGTGAACAAG GACATCTGGA ACTCGTGGAC GCCCGCGGAC
CGCGAGATCG TTCGCCAGGC TGCCATCGAG GCCGGCAAGG AAGAAATCGC CATCGCGCGC
AAGGGCCTGA TCGAGACGGA CAAGCCCCTG CTCAAGGAGA TCGCCAGCCA CGGCGTCACC
GTGACGCAGC TCACCCCCGA CGAGCGGCAG GCCTTCGTGC AGGCCACCCG CCCGGTCTTC
GACAAGTGGA AGGGACAGAT CGGCGCGGAC CTCGTGAACG CGGCGGAAAA GGCGGTGGCG
AAGAGGTAG
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| Protein sequence | MQLRTFLATA VAAAAALAFS AAPAAAQNYK SEYRMSLVVG TAFPWGKGGE LWANKVRERT
QGRINIKLYP GVSLIQGDQT REFSALRQGV IDMAVGSTIN WSPQVKALNL FSLPFLFPDY
ASVDVVTQGE VGKSIFQTLE KAGVVPLAWG ENGYREISNS KRPIKTPADL KGLKVRVVGS
PLFLDTFTAL GANPTQMSWA DAQPAMASGA VDGQENPLSI YLAAKLYTVA QKHVTLWGYM
NDPLIFVVNK DIWNSWTPAD REIVRQAAIE AGKEEIAIAR KGLIETDKPL LKEIASHGVT
VTQLTPDERQ AFVQATRPVF DKWKGQIGAD LVNAAEKAVA KR
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