| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4062 |
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| Symbol | prfC |
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| ID | 4666000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4513297 |
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| End bp | 4514925 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639825249 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_972377 |
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| Protein GI | 120612699 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTACG CTCCCGAAAC ACGGCGACGC CGCACCTTCG CCATCATCTC CCACCCCGAC
GCTGGCAAGA CCACGCTCAC CGAAAAGCTG CTGCTGTTCT CGGGCGCGAT CCAGATCGCC
GGCGCCGTGA AAGGCCGCAA GGCCAGCCGC CACGCCACGT CGGACTGGAT GGAAATCGAG
AAGCAGCGCG GCATCTCGGT GGCCTCGTCG GTCATGCAGA TGGCCTACCG CGACCACGTG
GTGAACCTGC TGGACACGCC CGGCCACAAG GACTTCTCGG AAGACACCTA TCGCGTGCTC
ACCGCCGTGG ATTCCGCGCT CATGGTGATC GATGCGGCCA ACGGCGTGGA ATCGCAGACG
CGGCGGCTGA TCGAGGTCTG CCGGCAGCGC GACACCCCCA TCATCACTTT CGTCAACAAG
ATGGACCGCG AGGTGCGCGA GCCCCTGGAC ATCCTCGACG AGGTCGAGCG CGAGCTCGGC
ATGCCCTGCG TGCCCATGAC CTGGCCGGTA GGACAGGGCA AGAGCTTCGG CGGCATCATC
AATCTGCGCA CCCAGGCGAT GACCGTGTTC GAGGCCGGCA GCGAGCGCAG GCCGCAGGAT
TTCGAGGCCA TCCCCCTGAG CGAGGCCGAC ACGCTGCGGG CCCGGTTCGG ACACACCTTC
GACGAGGCGC TCGAGAGCAT GGAACTGGCC GTGGGCGCCT CCCCGGCGTG GGACCACGAG
GCCTTCCTCG CGGGCAAGCA GACGCCCGTG TTCTTCGGCT CCGGCGTGAA CAACTTCGGC
GTGATGGAGG TGCTCGACGC CCTCGTGGAT CTCGCGCCCT CGCCGCGCCC GCGCACGAGC
AACCTCGTGG TGAACAGGCA GTCCGTCGAG AAGACGGTGT TGCCCGAGGA AACCAGCTTC
TCCGGCGTGG TGTTCAAGGT GCAGGCCAAC ATGGACGCCA ACCACCGCGA CCGCATCGCC
TTCGTGCGCG TGGCCTCCGG CAGGTACACC CCGGGCATGA AGCTCAAGGT GCAGCGCACC
GCCAAGGAAC TGCGTCCCAC CAGCGTGGTG ACTTTCATGA GCCAGCGGCG CGAAGCCGTG
GAAGAAGCCT ACGCGGGCGA CATCATCGGC TTCACGACGC ATGGCGGCGT GCAGCTGGGC
GACACCATCA CCGACGGCGC CAGCCTGCAG TTCACGGGCC TGCCCTTCTT CGCGCCCGAA
ATGTTCATGA CGGTGGTGCT GAAGAACCCG CTGCGCACCA AACAGCTGCA GCAGGGCCTG
GCCCAGCTGG GCGAGGAAGG CGCCATCCAG GTCTTCAAGC CCGACGCGGG CGGCAACATG
CTGCTGGGCG CCGTGGGCCA GCTGCAGTTC GAAGTGGTGC AGCACCGCCT CAAGACCGAA
TACGACTGCG ACGTGCGGCT GGAAAACTGC CAGTACACGG GGGCGCGCTG GATCACGGCG
GACACGCCGG CGGAGCTGCG GGCCTTCACG GACGCCTACC CGATGCGCAT GGCGCACGAC
GCGGCCGACA CCCTGGCCTA TCTGTGCACC AGCCCCTACG ACGTTCGGCT GGCGCAGGAG
AGGTTCCCCA AGATCCACTT CCACCCGCTG CGCGAGCATG CGGGACTTGC CCTGCAAACC
AATGCCTGA
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| Protein sequence | MSYAPETRRR RTFAIISHPD AGKTTLTEKL LLFSGAIQIA GAVKGRKASR HATSDWMEIE
KQRGISVASS VMQMAYRDHV VNLLDTPGHK DFSEDTYRVL TAVDSALMVI DAANGVESQT
RRLIEVCRQR DTPIITFVNK MDREVREPLD ILDEVERELG MPCVPMTWPV GQGKSFGGII
NLRTQAMTVF EAGSERRPQD FEAIPLSEAD TLRARFGHTF DEALESMELA VGASPAWDHE
AFLAGKQTPV FFGSGVNNFG VMEVLDALVD LAPSPRPRTS NLVVNRQSVE KTVLPEETSF
SGVVFKVQAN MDANHRDRIA FVRVASGRYT PGMKLKVQRT AKELRPTSVV TFMSQRREAV
EEAYAGDIIG FTTHGGVQLG DTITDGASLQ FTGLPFFAPE MFMTVVLKNP LRTKQLQQGL
AQLGEEGAIQ VFKPDAGGNM LLGAVGQLQF EVVQHRLKTE YDCDVRLENC QYTGARWITA
DTPAELRAFT DAYPMRMAHD AADTLAYLCT SPYDVRLAQE RFPKIHFHPL REHAGLALQT
NA
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