| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4053 |
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| Symbol | rplM |
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| ID | 4665373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4503153 |
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| End bp | 4503581 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639825240 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_972368 |
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| Protein GI | 120612690 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.536973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACTT TCAGCGCAAA GCCCGCTGAG GTCGTGCACG AGTGGTTTGT GATTGACGCG
ACCGACAAGG TCCTCGGACG AGTAGCCAGC GAAGTTGCTC TCCGTCTGCG CGGCAAACAC
AAGGCCATTT ACACGCCTCA CGTCGATACC GGCGATTTCA TCGTCATCAT CAACGCCTCC
AAGCTCAAGG TCACCGGCAC CAAGTCCCTG GACAAGGTGT ACTACCGCCA CTCCGGCTAT
CCCGGTGGCA TCACGGCGAC GAACTTCCGC GACCTGCAGG CCAAGCACCC CGGCCGCGCA
CTCGAGAAGG CCGTCAAGGG CATGCTGCCC AAGGGCCCCC TGGGCTACGC CATGATCAAG
AAGCTCAAGG TCTACGGCGG CGCGGAACAT CCGCACACCG CTCAGCAGCC CAAGGCGCTG
GAAATCTAA
|
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| Protein sequence | MSTFSAKPAE VVHEWFVIDA TDKVLGRVAS EVALRLRGKH KAIYTPHVDT GDFIVIINAS
KLKVTGTKSL DKVYYRHSGY PGGITATNFR DLQAKHPGRA LEKAVKGMLP KGPLGYAMIK
KLKVYGGAEH PHTAQQPKAL EI
|
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