Gene Aave_4053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4053 
SymbolrplM 
ID4665373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4503153 
End bp4503581 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content61% 
IMG OID639825240 
Product50S ribosomal protein L13 
Protein accessionYP_972368 
Protein GI120612690 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.536973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTT TCAGCGCAAA GCCCGCTGAG GTCGTGCACG AGTGGTTTGT GATTGACGCG 
ACCGACAAGG TCCTCGGACG AGTAGCCAGC GAAGTTGCTC TCCGTCTGCG CGGCAAACAC
AAGGCCATTT ACACGCCTCA CGTCGATACC GGCGATTTCA TCGTCATCAT CAACGCCTCC
AAGCTCAAGG TCACCGGCAC CAAGTCCCTG GACAAGGTGT ACTACCGCCA CTCCGGCTAT
CCCGGTGGCA TCACGGCGAC GAACTTCCGC GACCTGCAGG CCAAGCACCC CGGCCGCGCA
CTCGAGAAGG CCGTCAAGGG CATGCTGCCC AAGGGCCCCC TGGGCTACGC CATGATCAAG
AAGCTCAAGG TCTACGGCGG CGCGGAACAT CCGCACACCG CTCAGCAGCC CAAGGCGCTG
GAAATCTAA
 
Protein sequence
MSTFSAKPAE VVHEWFVIDA TDKVLGRVAS EVALRLRGKH KAIYTPHVDT GDFIVIINAS 
KLKVTGTKSL DKVYYRHSGY PGGITATNFR DLQAKHPGRA LEKAVKGMLP KGPLGYAMIK
KLKVYGGAEH PHTAQQPKAL EI