| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4035 |
|---|
| Symbol | |
|---|
| ID | 4666564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4486099 |
|---|
| End bp | 4486998 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639825222 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_972350 |
|---|
| Protein GI | 120612672 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.647876 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCG AGCAGCTCAA CTTTCATCAC CTCTTCTACT TCTGGCGGGT GGCCAAGCTG
GGCCACCTGA CGCGGGCGGC CGAGGAGGTG CATGCCTCGC AGTCGGCGCT CTCCGCGCAG
ATCCGCCAGC TGGAGGAGCG GCTCGGCGAG CCGCTGTTCA CGCGCGAAAA CCGGCGGATG
GTGCTGACCG AGGCAGGACA GGTGGTGCTG TCGTATGCCG AAGACATCTT CGGCCTGGGC
CAGGAGCTGC TGGGGCGGCT GCAGGGCCGC AGCCAGGGGA TGACACGGCT GCGCGTGGGC
GCGGTCGCCA CCATGTCGCG CAACTACCAG GAGAACCTGC TGCGCCCGCT GCTGGCCGAC
CCCGACGTGG TGCTGACCCT CGAATCGGGC CTGCTGGACG ACCTGCTGCA GCGGCTGCTC
GAGCACCAGC TGGACGTGGT GCTGGCCAAC CAGAGCGTGC CCGCCGACCC GGGCCGGCCG
CTGCACTGCC GCTTCCTGGC CAGCCAGGCC ATCTCCATCG TGGGCCCGGC CCACCGCTGG
CCGGCCGGCG GCCTGCGCGT GCCGCAGGAC CTGCACGGCA TGGACATCGC CCTGCCCGGC
CCCCGCCATG CCGTGCGCGG GCCCTTCGAT GCTCTGTGCG CTTCGGCCGG CGTGGCACCG
CGCCTGCGCG CCGAAGTGGA CGACATGGCC CTGCTGCGCC TCATCGCCCG CGACAGCGGC
TGGCTGTCGC TGCTGTCCGA GGTGGTGGTG CAGGACGAGC TGAAAAGCGG GCTGCTGGTG
ATCGCGGGCC AGTCGAGCGA ACTGACCGAG AGCTTCTACG CCATCACGGT GCCGCGGCGG
CACCGGGTGG AGGCGCTGGA GAAGTTGCTG GGTGTGCAAG CCGCCCAAGA AGCGGCGTAA
|
|---|
| Protein sequence | MRLEQLNFHH LFYFWRVAKL GHLTRAAEEV HASQSALSAQ IRQLEERLGE PLFTRENRRM
VLTEAGQVVL SYAEDIFGLG QELLGRLQGR SQGMTRLRVG AVATMSRNYQ ENLLRPLLAD
PDVVLTLESG LLDDLLQRLL EHQLDVVLAN QSVPADPGRP LHCRFLASQA ISIVGPAHRW
PAGGLRVPQD LHGMDIALPG PRHAVRGPFD ALCASAGVAP RLRAEVDDMA LLRLIARDSG
WLSLLSEVVV QDELKSGLLV IAGQSSELTE SFYAITVPRR HRVEALEKLL GVQAAQEAA
|
|---|
| |