| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4031 |
|---|
| Symbol | |
|---|
| ID | 4667288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4479736 |
|---|
| End bp | 4480611 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639825218 |
|---|
| Product | putative lysophospholipase L2 |
|---|
| Protein accession | YP_972346 |
|---|
| Protein GI | 120612668 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.17288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTT CGACCTCCTC CTTCCGTTCC GATGCGGACG GTACTTCCGT CGCGACGTAT
TCCTGGACCG ACGTGTCCGG CGAACCCGCG GGCGTGGTGC AGATCGCCCA CGGGCTCGCC
GAGCACGGCG AGCGCTACGA CCGCTTCGCC AGGGCGCTGA ACGCCGCCGG GTTCCTGGTT
CACGCGGTGG ACCACCGCGG CCATGGGCGC ACCGCGGGCG GACGCATGGG AGACTTCGGC
GCGGCCGGCT TCGACGGCCT GATCGCCGAC GTGGCCCAGT TCGGCGCCCT GCTGCGGGCC
CGGCACGGGA ATCTTCCACT CTTCCTCTTC GCGCACTCGA TGGGCTCCTT CGCCGCGCAG
GCCGCCCTCC TCGACCACTC GGGGACGTGG TCGGGCGTAG TCCTGTCCGG TTCGACCGCG
CTGGACCTGT TCGCCGCCGA CCTGGCGAAT CCGCCGCCAG GCGCTCCTGC CGGCCTGGCG
GCACTCAACG CCGGCTTCGT GTACCGCACG GGCTACGAAT GGCTGTCGCG CGACGCTGCC
GAGGTGGATG CCTACGTTGC CGACCCGTGG TGCGGATGGG ACGTTCCCCC CGACGTGTTC
CCGGCCTTGA TGGCGCCCGC CGCCCGCCTC GCCGATCCGG CCCGGCTGTC GGGCATCCGC
AGCGACCTGC CCATCCTCAT CGCTTCAGGC GACGCGGATC CGCTCGCTGC CGGAGGCGAG
CGGCTGCGGA TCCTGGGCCA GCGCTACCAC GACGCGGGCA TCGCCGACGT GACCGTCAGG
CTTTACCCAG CCGGCCGCCA TGAAATCCTC AACGAGACCA ACCTTGGCGA AGTGACTGCC
GACATCGTGG CCTGGCTGCG CGCGCACGCG GCATGA
|
|---|
| Protein sequence | MSTSTSSFRS DADGTSVATY SWTDVSGEPA GVVQIAHGLA EHGERYDRFA RALNAAGFLV
HAVDHRGHGR TAGGRMGDFG AAGFDGLIAD VAQFGALLRA RHGNLPLFLF AHSMGSFAAQ
AALLDHSGTW SGVVLSGSTA LDLFAADLAN PPPGAPAGLA ALNAGFVYRT GYEWLSRDAA
EVDAYVADPW CGWDVPPDVF PALMAPAARL ADPARLSGIR SDLPILIASG DADPLAAGGE
RLRILGQRYH DAGIADVTVR LYPAGRHEIL NETNLGEVTA DIVAWLRAHA A
|
|---|
| |