| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4017 |
|---|
| Symbol | |
|---|
| ID | 4668076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4465483 |
|---|
| End bp | 4466631 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639825204 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_972332 |
|---|
| Protein GI | 120612654 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.530875 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCAA TGAACTACCG CGGCCCCTAC CGCGTGCGCG CGTCGCACAA GGCCGAGCCC
GACATCGAAC ATCCCAACGA TGCCATCGTG CGCGTCACGC GCGCGTGCAT CTGCGGCTCG
GACCTGCACC TCTACCACGG CCTCGTACCC GACACGCGCG TGGGCACCAC CTTCGGCCAC
GAGTTCACCG GCGTGGTCGA AGCCGTCGGC CCCTCGGTGC GCAACCTGAA ACCCGGCGAC
CACGTGCTGG TGCCCTTCAA CATCTTCTGC GGATCGTGCT ACTTCTGCCA GAAGGAGCTC
TACAGCAACT GCCACAACAC CAACCCCGAG GCCACGGCCG TGGGCGGCAT CTACGGCTAC
TCGCACACCA CCGGCGGCTA CGACGGCGGC CAGGCCGAGT ACGTGCGCGT CCCCCTGGCG
GACGTCGGCC CGCAGGTCAT CCCCTCCGAC ATCGACCTGG ACGACGCCGT GCTGCTCACC
GACGCGCTGC CCACCGGCTA CCAGGCCGCG GAGATGGGCG ACATCCAGGA GGGCGACACC
GTCGTGGTGT TCGGCGCGGG GCCCGTGGGC ATCTTCGCGG CGCGCAGCGC CTGGCTGCTC
GGCGCCGGGC GCGTGATCGT GGTGGACCAC GTGGAATACC GGCTCGACTT CGTGCGCCAG
TACGCGCCCT GCGAAACCGT GGACTTCAAG AGCGTGCGCG ACATGGCCGT GCACCTCAAG
CGCATGACCG ACGGCCTGGG GCCCGACGTC TGCATCGATG CCGTGGGCTG CGAGGCCGCG
GGATCGTTCG CGCAATCCCT GACGGGCGTG CGCCTGAAAC TGCAGGGCGG CGCGGCCACG
GTGCTGCACT GGTGCATCAA CTCCGTGCGC AAGGGCGGCA CCGTATCGAT CGTCGGCGTG
TACGGCCCCA CCTTCAACGC CGTGCCCATC GGCAATGCCG TGAACAAGGG ACTGACGCTG
CGCATGAACC AGGCGAGCGT GAAGCGCCAC CTGCCCCGGC TCATCGAGCA CATCCAGGCC
GGGCGCCTCA AGCCCCGCGA GATCATCACC CACCGCTTCG CGCTGGAGGA CATCGCCGAG
GCCTACCACA CCTTCTCGAG CAAGCTGGAC GGCTGCATCA AGCCCGTGAT CGTGCCCTCC
GCCGCCTGA
|
|---|
| Protein sequence | MLAMNYRGPY RVRASHKAEP DIEHPNDAIV RVTRACICGS DLHLYHGLVP DTRVGTTFGH
EFTGVVEAVG PSVRNLKPGD HVLVPFNIFC GSCYFCQKEL YSNCHNTNPE ATAVGGIYGY
SHTTGGYDGG QAEYVRVPLA DVGPQVIPSD IDLDDAVLLT DALPTGYQAA EMGDIQEGDT
VVVFGAGPVG IFAARSAWLL GAGRVIVVDH VEYRLDFVRQ YAPCETVDFK SVRDMAVHLK
RMTDGLGPDV CIDAVGCEAA GSFAQSLTGV RLKLQGGAAT VLHWCINSVR KGGTVSIVGV
YGPTFNAVPI GNAVNKGLTL RMNQASVKRH LPRLIEHIQA GRLKPREIIT HRFALEDIAE
AYHTFSSKLD GCIKPVIVPS AA
|
|---|
| |