Gene Aave_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4016 
Symbol 
ID4668082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4464387 
End bp4465289 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content72% 
IMG OID639825203 
Productalpha/beta hydrolase fold 
Protein accessionYP_972331 
Protein GI120612653 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.930496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGG ACCCTCCCCG CCACGCCGTC TCGCACCGTC TGCGCATCGA CGGCCTTTCG 
CTGCATTGCA TCGAATATCC CGGCGATGGC CCGCCGCTCG TGCTGCTGCA TTCGCTGACC
GGCAACGCCC GCATCTTCGA CGGGCTCATC CTCGCCGGCC TTGCGGACCA CTTTCGCGTA
CTGGTGCCGG AGATGTGCGG CCGGGGGCAA TCGGAAACCG CGTTCACGCA GTTGTCGCTC
GCCGACGGGC TGCGCCACCT GCTCGCCTGG CTGGATCACT TCGGCATCGG CTCCGCCGCG
CTCTGCGGCC ACTCCTTCGG CGGGCTGGCA GCGCTCTACG CCACGGACCG CGCGCCCGCG
CGCGTCAGCC ACCTCGCGCT GCTCGATGCG GCGGCCGACA TGCATCCGGC CGCGCCCGCG
CTGGCGGCCA TGGCGGCCAT CCGGCTCGAC GGGCTGTACC CCTCGGTGCA GGCCTACCGC
GATGCGGTCG TGCGCCCGGC ATCATTTTCG CAGCCGTGGC ACGCCGCGAT GCAGGGCTTC
GTGGAGGCCG ACCTCGCGCC CGTCGCGCCG GGCATCTACA CCACCGCCGC ACGGTCGGGC
ACCGCACACA TCGCCTCGCT GCACGTGCAG AGCATGGCGC AGCGCGAATG GCGCGACTGC
GCCGCCCGTG TGCAGGTGCC GGCCCTGCTC GCGCAGGCCG CGGAGCCTTT CTGGATGGGC
ATTCCCATGC TCACCGACGA CGGCGCCGGC ACCACGGCAC GCCTTCTGCG CGCGCCCCGC
GTGCGCATCC CGGGCAACCA CTTCACCATG CTCTATGGCG CCGGCGCGGA GCGCATCGTG
CAGGCACTCG CGCCGTGGAG CGGCCAGGGC ACTGCGGAGC CCGCAGCCGC CATGACCGTC
TGA
 
Protein sequence
MPMDPPRHAV SHRLRIDGLS LHCIEYPGDG PPLVLLHSLT GNARIFDGLI LAGLADHFRV 
LVPEMCGRGQ SETAFTQLSL ADGLRHLLAW LDHFGIGSAA LCGHSFGGLA ALYATDRAPA
RVSHLALLDA AADMHPAAPA LAAMAAIRLD GLYPSVQAYR DAVVRPASFS QPWHAAMQGF
VEADLAPVAP GIYTTAARSG TAHIASLHVQ SMAQREWRDC AARVQVPALL AQAAEPFWMG
IPMLTDDGAG TTARLLRAPR VRIPGNHFTM LYGAGAERIV QALAPWSGQG TAEPAAAMTV