Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4005 |
Symbol | |
ID | 4669194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4444572 |
End bp | 4446464 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639825192 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_972320 |
Protein GI | 120612642 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCCA CCCCCTCCCA GGCTGCCGCC AGGCGGCCTC CCAGCCAGGC CCGCATCCAG GCGGCCCTGA AGCAATCCTT CGGCCTGCGC GCCCTGCGCG CGGGCCAGCG CGACGTGATC GACCGCGTGC TGCGCGGCGA GAACACGCTG GCCATCATGC CCACGGGCGC CGGCAAGTCG CTGTGCTACC AGTTGCCTGC GCTGCTGCTC GCGGGCCGTA CGGTGGTGGT GTCGCCGCTC ATCGCGCTCA TGCGCGACCA GTGCGACGCG CTGCGCGAGC GCGGCGTGCC GGCCGTGCAA TTGCACAGCG CGCTGGACGC CGAGGAAACG CGCGCCGCCG AGGCAGCCGT GGCCGACGGC AGCGCGCGCA TCGTGCTCAC CACGCCCGAG CGGCTGGCCG ACGCCGGCTT CCAGGCGCTG CTCGAAGCCG GCGGGCCCGT GGACCTGCTG GCCGTGGACG AGGCACACTG CATCTCGCAA TGGGACCACG ACTTCCGCCC GGCCTTCCTC GACATCGCCC AGGCCCTGCC GCGCCTGGGC CGCCCCACGG TGCTGGCGCT CACCGCGACC GCCGCCGGCC CGGTGGCGCA GGACATCCGC CGGCAGCTGG GCATTCCGGC CGCGGGCGTG GTCGATACCG GCACCTACCG GCCCAACCTG CACTACCGCG CCGAGCAGCT CGCCGACGAG AAGGAAAAGC GCGACCGCCT GCTGCGCACC GTGAAGGAAT CCACAGGCTC CGGCATCGTC TACACCGCCA CGGTGAAGGC CGCGGAGGAG GTGCATGCGC TGCTGGCCGG TGCCGGCGAA TCCGCGGGCA TCTACCACGG CCGCATGCCC GCCGCCGAGC GTGGCCGGGC GCAGGACCGC TTCATGGCCG GCGACCTGCG GGTGATGGTC GCCACCAACG CCTTCGGCCT GGGCATCGAC AAGCAGGACG TGCGCTTCGT GATCCATTAC CAGATGCCCG GCGGGCTGGA CGCGTACTAC CAGGAGTCCG GCCGGGCCGG GCGGGACGGG CAGCCGGCCG AATGCACGCT GCTCTTCCTG CGCAAGGACA AGGCCGTGCA GCAGTTCTTC CTGGCGGGCC GCTACCCGAC GCCCGACGAC CTCGACGCGC TTTACGCCGC GCTGCAGTCA CCCCCGCCGG GCGCGCACGA AGGCTGGACA CTGGACCTGC TGCAGCAATC GCTGGACCGG CCGCGCCCCA AGCTGCAGGT GGCGCTGGGC CTGCTGCGCC GCCGCCGCAT CGTCACGCAG AAGGCCGACG GCCGCCTCTC GCTGCGCCGC GCGGGCATGG ACAGCGATGC GCTGGTCGCG CTGCTCGAAG ACTACGCGCA AAAGCGCACG CAGGACCAGG ACGGCCTCGA GCGCATGGTG TTCTACGCGC AGACCGGGGG CTGCCGGTGG GAGGTGTTGC TGGATTACTT CGGCCATGCG CGACCGGCGC AGCGTTGCGG CACCTGCGAC AACTGCCGGC GGATCGCTGC GCTCGACGCG CAGCAGGCCA TAGCGAACGC GGCCGCGTCG TCCGCGGCCG TACCGCCCAC GCTCGCGCCG GCCGCACTGG CCACGGCCCG CAAAAAGCCG TCGGACGTGC CGGCCATCGC CCTGGTATCG CCAGGCCCTG CCGCGGCCGA GGCGAAGCCC GCCACGCCCG CCCGCCCCGT GTTCGAACTC GGCATGCCGG TGCGTGTGAA GCGCTACGGC GAAGGCACCG TGCGCGCGAT CGCATCGGAA TCGATCACCG TGGCATTCTC GGACGGCAGC GAGCGCTGCT TCCAACCCGA GTACGTGCGC AAGGCGCGCA GACGCCGGGC GGCGGCCAAC GATGCCGCGG CGGAGGGTGA AGCGGCCATG GTAGGGCCTG CATTGGCGCT GCGCACCGCT TGA
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Protein sequence | MSSTPSQAAA RRPPSQARIQ AALKQSFGLR ALRAGQRDVI DRVLRGENTL AIMPTGAGKS LCYQLPALLL AGRTVVVSPL IALMRDQCDA LRERGVPAVQ LHSALDAEET RAAEAAVADG SARIVLTTPE RLADAGFQAL LEAGGPVDLL AVDEAHCISQ WDHDFRPAFL DIAQALPRLG RPTVLALTAT AAGPVAQDIR RQLGIPAAGV VDTGTYRPNL HYRAEQLADE KEKRDRLLRT VKESTGSGIV YTATVKAAEE VHALLAGAGE SAGIYHGRMP AAERGRAQDR FMAGDLRVMV ATNAFGLGID KQDVRFVIHY QMPGGLDAYY QESGRAGRDG QPAECTLLFL RKDKAVQQFF LAGRYPTPDD LDALYAALQS PPPGAHEGWT LDLLQQSLDR PRPKLQVALG LLRRRRIVTQ KADGRLSLRR AGMDSDALVA LLEDYAQKRT QDQDGLERMV FYAQTGGCRW EVLLDYFGHA RPAQRCGTCD NCRRIAALDA QQAIANAAAS SAAVPPTLAP AALATARKKP SDVPAIALVS PGPAAAEAKP ATPARPVFEL GMPVRVKRYG EGTVRAIASE SITVAFSDGS ERCFQPEYVR KARRRRAAAN DAAAEGEAAM VGPALALRTA
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