Gene Aave_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4005 
Symbol 
ID4669194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4444572 
End bp4446464 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content73% 
IMG OID639825192 
ProductATP-dependent DNA helicase RecQ 
Protein accessionYP_972320 
Protein GI120612642 
COG category[L] Replication, recombination and repair 
COG ID[COG0514] Superfamily II DNA helicase 
TIGRFAM ID[TIGR00614] ATP-dependent DNA helicase, RecQ family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCA CCCCCTCCCA GGCTGCCGCC AGGCGGCCTC CCAGCCAGGC CCGCATCCAG 
GCGGCCCTGA AGCAATCCTT CGGCCTGCGC GCCCTGCGCG CGGGCCAGCG CGACGTGATC
GACCGCGTGC TGCGCGGCGA GAACACGCTG GCCATCATGC CCACGGGCGC CGGCAAGTCG
CTGTGCTACC AGTTGCCTGC GCTGCTGCTC GCGGGCCGTA CGGTGGTGGT GTCGCCGCTC
ATCGCGCTCA TGCGCGACCA GTGCGACGCG CTGCGCGAGC GCGGCGTGCC GGCCGTGCAA
TTGCACAGCG CGCTGGACGC CGAGGAAACG CGCGCCGCCG AGGCAGCCGT GGCCGACGGC
AGCGCGCGCA TCGTGCTCAC CACGCCCGAG CGGCTGGCCG ACGCCGGCTT CCAGGCGCTG
CTCGAAGCCG GCGGGCCCGT GGACCTGCTG GCCGTGGACG AGGCACACTG CATCTCGCAA
TGGGACCACG ACTTCCGCCC GGCCTTCCTC GACATCGCCC AGGCCCTGCC GCGCCTGGGC
CGCCCCACGG TGCTGGCGCT CACCGCGACC GCCGCCGGCC CGGTGGCGCA GGACATCCGC
CGGCAGCTGG GCATTCCGGC CGCGGGCGTG GTCGATACCG GCACCTACCG GCCCAACCTG
CACTACCGCG CCGAGCAGCT CGCCGACGAG AAGGAAAAGC GCGACCGCCT GCTGCGCACC
GTGAAGGAAT CCACAGGCTC CGGCATCGTC TACACCGCCA CGGTGAAGGC CGCGGAGGAG
GTGCATGCGC TGCTGGCCGG TGCCGGCGAA TCCGCGGGCA TCTACCACGG CCGCATGCCC
GCCGCCGAGC GTGGCCGGGC GCAGGACCGC TTCATGGCCG GCGACCTGCG GGTGATGGTC
GCCACCAACG CCTTCGGCCT GGGCATCGAC AAGCAGGACG TGCGCTTCGT GATCCATTAC
CAGATGCCCG GCGGGCTGGA CGCGTACTAC CAGGAGTCCG GCCGGGCCGG GCGGGACGGG
CAGCCGGCCG AATGCACGCT GCTCTTCCTG CGCAAGGACA AGGCCGTGCA GCAGTTCTTC
CTGGCGGGCC GCTACCCGAC GCCCGACGAC CTCGACGCGC TTTACGCCGC GCTGCAGTCA
CCCCCGCCGG GCGCGCACGA AGGCTGGACA CTGGACCTGC TGCAGCAATC GCTGGACCGG
CCGCGCCCCA AGCTGCAGGT GGCGCTGGGC CTGCTGCGCC GCCGCCGCAT CGTCACGCAG
AAGGCCGACG GCCGCCTCTC GCTGCGCCGC GCGGGCATGG ACAGCGATGC GCTGGTCGCG
CTGCTCGAAG ACTACGCGCA AAAGCGCACG CAGGACCAGG ACGGCCTCGA GCGCATGGTG
TTCTACGCGC AGACCGGGGG CTGCCGGTGG GAGGTGTTGC TGGATTACTT CGGCCATGCG
CGACCGGCGC AGCGTTGCGG CACCTGCGAC AACTGCCGGC GGATCGCTGC GCTCGACGCG
CAGCAGGCCA TAGCGAACGC GGCCGCGTCG TCCGCGGCCG TACCGCCCAC GCTCGCGCCG
GCCGCACTGG CCACGGCCCG CAAAAAGCCG TCGGACGTGC CGGCCATCGC CCTGGTATCG
CCAGGCCCTG CCGCGGCCGA GGCGAAGCCC GCCACGCCCG CCCGCCCCGT GTTCGAACTC
GGCATGCCGG TGCGTGTGAA GCGCTACGGC GAAGGCACCG TGCGCGCGAT CGCATCGGAA
TCGATCACCG TGGCATTCTC GGACGGCAGC GAGCGCTGCT TCCAACCCGA GTACGTGCGC
AAGGCGCGCA GACGCCGGGC GGCGGCCAAC GATGCCGCGG CGGAGGGTGA AGCGGCCATG
GTAGGGCCTG CATTGGCGCT GCGCACCGCT TGA
 
Protein sequence
MSSTPSQAAA RRPPSQARIQ AALKQSFGLR ALRAGQRDVI DRVLRGENTL AIMPTGAGKS 
LCYQLPALLL AGRTVVVSPL IALMRDQCDA LRERGVPAVQ LHSALDAEET RAAEAAVADG
SARIVLTTPE RLADAGFQAL LEAGGPVDLL AVDEAHCISQ WDHDFRPAFL DIAQALPRLG
RPTVLALTAT AAGPVAQDIR RQLGIPAAGV VDTGTYRPNL HYRAEQLADE KEKRDRLLRT
VKESTGSGIV YTATVKAAEE VHALLAGAGE SAGIYHGRMP AAERGRAQDR FMAGDLRVMV
ATNAFGLGID KQDVRFVIHY QMPGGLDAYY QESGRAGRDG QPAECTLLFL RKDKAVQQFF
LAGRYPTPDD LDALYAALQS PPPGAHEGWT LDLLQQSLDR PRPKLQVALG LLRRRRIVTQ
KADGRLSLRR AGMDSDALVA LLEDYAQKRT QDQDGLERMV FYAQTGGCRW EVLLDYFGHA
RPAQRCGTCD NCRRIAALDA QQAIANAAAS SAAVPPTLAP AALATARKKP SDVPAIALVS
PGPAAAEAKP ATPARPVFEL GMPVRVKRYG EGTVRAIASE SITVAFSDGS ERCFQPEYVR
KARRRRAAAN DAAAEGEAAM VGPALALRTA