Gene Aave_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3980 
Symbol 
ID4668573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4410946 
End bp4413117 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content71% 
IMG OID639825169 
Productcyanophycin synthetase 
Protein accessionYP_972297 
Protein GI120612619 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTT TCAATGACAT CCAACTGCTG CGCATCACCT ACCTGCGCGG CCCCAGCGTC 
TGGACCTATC GTCCCATCCT CGAGGTCTGG CTGGACCTGG GCGAGCTGGA GGACTGGCCG
TCGAACAAGA TCCCCGGCCT CAACGAACGC CTGACCGCCT GGCTGCCGGC CCTGATCGAG
CACCACTGCG GCGTGGGCGA GCGCGGCGGG TTCATCCAGC GCCTGGAAGG CGGTACCTGG
ATGGGCCACG TGCTGGAGCA CATCGTGATC GAGCTGCTGA ACCTGGCGGG CATGCCGGCC
GAATTCGGCC AGACGCGCGA GATCTCCCGG CGCGGCGTGT ACCGCATGGT CTTCCGCTGC
CCCGAGGAGG ATGTGGCGCG CACAGCGCTC GCCTGGGGCC ACAAGCTGCT GATGGCGGCC
ATCAACGACC AGCCCTTCGA CGTCAAGCCG GCCATCCAGG CCATCAAGAC CAGCATCAAC
GACAGCTACC TGGGCCCCAG CACCGGCAGC ATCGTGGACG CGGCGGGCGA GCGCCGCATC
CCGCACATCC GCCTCAACGA CGGCAACCTG GTGCAACTGG GCTACGGCGC GGCGCAGCGC
CGCATCTGGA CGGCCGAGAG CGACCAGACC AGCGCCATCG CCGAAGGCAT CGCCCAGGAC
AAGGACTTCA CCAAGCGCCT GCTGGCCGCC TGCGGCGTGC CGGTGCCCGA AGGCCGCGTG
GTCGCCGACG CCCAGGAGGC CTGGGAGGTC GCGCAGGACA TCGGTTTTCC CGTCACCGTC
AAGCCGTCGG ACGGCAACCA CGCACGCGGC GTGACGCTGG AGCTGTACGG CGAGGCCGAG
ATCAAGGCCG CCTTCGCCCT GGCCGAGCCC GAGGGGTCGG CGGTGATCGT CGAGCGCTTC
ATCGAGGGCA CCGAACACCG CCTGCTGGTG GTGGGCGGCA AGGTGGTGGC GGCCTGCCGC
GGCGAGACGG TCAGCGTCTC GGGCAATGGC CGCTCCACGC TGCGCGAGCT GGTGGACGTG
GTCAACCAGG ATCCCCGGCG CGGCCCCGAG CAGGAGTACC CCCTCGACTG GATCAAGCTG
GACGCGCCCG CCGTGCAGCT GGAGCTGCAG CGCCAGGGCG TCACGCCCGA CACCGTGCCC
GCACAGGGCC AAAGCATCCT GCTGCAGCGC AACGGCAACA TGGCCATCGA CTGCACGGAC
GAGGTGCATC CCGACGTCGC CTACTACGCC CAGCTGGCGG CCAAGATCGT GGGCCTGGAC
ATCGCCGGCA TGGACATGAT CCTGCAGGAC GTCTCCCGGC CCATGAAGGA GCAGCGCGGC
GCCATCCTCG AGGTGAACGC CGGCCCCGGC CTGCTGATGC ACCTCAAGCC CACCAGCGGC
ACGCCCCGCC CCGTGGGCAT GGCCATCGTG GACCACCTCT TCCCGCGCAC CGACGAGGGC
ACGGGCGCGG GGCGCATCCC GCTGGTGGGC ATCGCCGGCA CGCAGGGCAA CGCCTTCATC
GCGCGGCTGG TGGGCTGGCT GCTGCAACTC TCGGGCAAGC TCACCGGCGT GGCCTGCAGC
GAGGGCATGT TCCTGTCCAA CCGCCAGACC CAGAAGACCG ACACCGCCCA CTGGGCCGGC
GCCCACCGCC TGCTGACCAA CCGCCTGGCC GAGGCCGCGG TGGTGCAGAC CACGGCCCGC
TCCATCCTGG AGGAGGGCCT GGCCTACGAC CGCTGCCTGG TCGGCGTGGT CACCGACATG
CAGGGCTGGG AACAGCTGGC CGACCACGAC GTGCTCGAGC CCGCGCAGAT GACCCGCGTG
ATGCGCACGC AGATCGACCT GGTGCTCGAC GAGGGCGCGG GCGTGCTCAA CGCCGACGAC
GCCCAGGTGG CGGACCTGGG GCGCCTGTGC GACGGCGAGG TGCTGTTCTA CGCGCTGCAG
GCCGACAATC CGGTGGTGGC CGGGCATCGC GCCGGGAAGG ACGGCCGCGC CGTCTTCGTG
CAGGACGGCA ACGTGGTGCT GGCCTCCGGG GCCAAGGAGC GGGTCCTGGG CACGCTGGCG
AGCCTGACGC TGGCCGGCGG CAGGCGGCCC GATACGGCGG CCCTGCTGGC CGCCATCGCC
ACGGCCTGGG CCATGGACAT CACGCCCGAC CTGATTGCCG CCGGCATCAA GACCTTCGAG
TATCCGAATT GA
 
Protein sequence
MATFNDIQLL RITYLRGPSV WTYRPILEVW LDLGELEDWP SNKIPGLNER LTAWLPALIE 
HHCGVGERGG FIQRLEGGTW MGHVLEHIVI ELLNLAGMPA EFGQTREISR RGVYRMVFRC
PEEDVARTAL AWGHKLLMAA INDQPFDVKP AIQAIKTSIN DSYLGPSTGS IVDAAGERRI
PHIRLNDGNL VQLGYGAAQR RIWTAESDQT SAIAEGIAQD KDFTKRLLAA CGVPVPEGRV
VADAQEAWEV AQDIGFPVTV KPSDGNHARG VTLELYGEAE IKAAFALAEP EGSAVIVERF
IEGTEHRLLV VGGKVVAACR GETVSVSGNG RSTLRELVDV VNQDPRRGPE QEYPLDWIKL
DAPAVQLELQ RQGVTPDTVP AQGQSILLQR NGNMAIDCTD EVHPDVAYYA QLAAKIVGLD
IAGMDMILQD VSRPMKEQRG AILEVNAGPG LLMHLKPTSG TPRPVGMAIV DHLFPRTDEG
TGAGRIPLVG IAGTQGNAFI ARLVGWLLQL SGKLTGVACS EGMFLSNRQT QKTDTAHWAG
AHRLLTNRLA EAAVVQTTAR SILEEGLAYD RCLVGVVTDM QGWEQLADHD VLEPAQMTRV
MRTQIDLVLD EGAGVLNADD AQVADLGRLC DGEVLFYALQ ADNPVVAGHR AGKDGRAVFV
QDGNVVLASG AKERVLGTLA SLTLAGGRRP DTAALLAAIA TAWAMDITPD LIAAGIKTFE
YPN