Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3979 |
Symbol | |
ID | 4668562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4408399 |
End bp | 4410720 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639825168 |
Product | ABC transporter-related protein |
Protein accession | YP_972296 |
Protein GI | 120612618 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACATC ACCATCCTGC GGACGCCTCG GGTGTCTTGA CGGGCCCCAT CGGGGCCGAA CTGCGAGCCA GGCTCGCGCC CCCGGAAAAC GTGCTGGCCG CGCTGGAGGT TGACCTGAGC GCCGCCCTGC GCTTCGCGCC GGGCCTGCTG ATGCTGACCG CGCAGCGCCT GCTGGCGCGC GATCCGGAAG GCGGTGTCCG CGACTGGGCG CTGTCGCCGG GCCTGTCGCT GCGGCTGATC GAGCACGGCG GCGTCGGCAC GCTGGAACTG CACGACGCCA CGCAGCGCCT CGCGCTGTGG CGCTTCACGC TGGGCCACCA CCCCCAGGCG CTGCTGCTGC AGCAGAAATT CGAGCAACTG GTGGGGTACC TCTGTGCCTC GGGGGACTCG CCGCGGCAGG CCGGGCCGGA CGACGAGGCG CGCTGCGAGG CCTGCGGCGC CGTGCTGCCG CCCGATGCGG ACGAGTGCCC CGCCTGCGCA CGCCAGCAGG CGCCCCAGAC ATCCACCTGG GTGCTGCTGC GGCTGTGGCG CTTCGCGCAT CCCTACAGGC ACCAGCTTCT GCTGGGCTTC CTGCTCACGC TGGCTTCCAC CGGGGCCACC CTGGTCGCGC CCTACCTGAC GATTCCCATC GTGGACAGGA TCCTGATCCC GTTCCAGAAC GGCCAGCGGA TCGACGCGGG CCTGGTGGGC TTCTACCTGG GCGCCCTCCT GCTCTCGGCC CTGGTGGCCT GGGGACTGGG CTGGGCGCGC ACCTTCGTGC TGGCCAGGGT GTCCGAGCGC ATCGGCTCGG ACCTGCGCAC CACCACCTAC AAGCACCTGC TGACGCTCTC GCTCGACTAC TACGGCAGCA AGCGCACGGG CGACCTGATG GCGCGCATCG GCGCGGAGAC GGACCGCATC AACCTCTTCC TGTCGCTCAA TGCGCTCGAC TTCGCCACCG ACGTGCTGAT GATCGCGATG ACCTCGGTCA TCCTGTTCTC CATCAATCCC TGGCTGGCGC TGGTCACACT GGTGCCGCTG CCCTTCATCG CGTGGATGAT CCACCTGGTG CGCGACCGCC TGCGCACGGG CTTCGAGAAA ATCGACCGCG TCTGGTCCGA GGTGACCAAC GTGCTCGCCG ACACCATCCC GGGCATCCGC GTGGTCAAGG CCTTCGCCCA GGAAAAGCGC GAGTCCGACC GCTTCGCCCA GGCCAACCTC GTCAACCTGC AGGCCAACGA CCGGGTGAAC AAGACCTGGT CGCTGTTCAC GCCCACGGTG ACGCTGCTCA CCGAGGTCGG CCTGCTGATC GTGTGGGGCT TCGGCATCTG GCTGGTGGCC GGAGGGCAGA TCACCGTCGG TATCCTGACG GCCTTCATCG CCTACATCGG CCGCTTCTAC AGCCGGCTCG ACTCGATGAG CCGCATCGTG TCGGTCACGC AGAAGGCGGC CGCGGGCGCC AAGCGCATCT TCGACATCCT GGACCACGTC AGCAGCGTGC CCGATCCGGT CCAGCCCGTC GAGCTGCCGC GCGTGGAAGG CCGCCTCACG CTGGCCAACG TCAACTTCCG CTACGGCAGC CGCTCCGTCA TCCGGAACCT CGATTTGCAG ATACGCCCGG GCGAGATGAT CGGCCTCGTG GGCCACAGCG GCTCGGGCAA GAGCACGCTG GTGAACCTCA TCAGCCGCTT CTACGACGTC ACCGAAGGCT CCATCCAGGT GGACGGGGTG GACGTGCGCC GCCTGCGCGT GGCCGACTAC CGCCGCCACA TCGGTCTGGT GCTGCAGGAG CCGTTCCTGT TCTTCGGCAC CATCGCCGAG AATATCGCCT ACGGCAAGCC TCATGCTTCG CGCGAAGAGA TCGTCGCGGC GGCCCGTGCG GCCCATGCCC ACGAATTCAT CCTGCGCCTG CCCCATGGCT ACGACTCGCT GGTGGGCGAG CGCGGCCAGG GCCTGTCGGG CGGCGAGCGC CAGCGCATCA GCATCGCGCG CGCCCTGCTC ATCGATCCGC GCATCCTCAT CCTCGACGAG GCCACCTCGG CCGTCGATAC CGAAACCGAG AAGGAAATCC AGAAGGCGCT GGACAATCTC GTGCAGGGGC GCACCACCAT CGCCATCGCC CACCGGCTCT CCACGCTGCG CAAGGCCGAC CGCCTCGTGG TGATGGACCG CGGCGAGATC GTCGAGGTCG GTCCGCACGA CGAACTCATG GAGAAGCAGG GCGCTTACTG GCGCCTCTAC GAAGCCCAGG CGCGCCGCGC CGAGGAAGAC GCCCAGGCGT CGGGCCTCGT GGTGGTGGAC AGCGCGCTGC TCCATTCCTC CCATCCCGCG GGCACGGTCT GA
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Protein sequence | MQHHHPADAS GVLTGPIGAE LRARLAPPEN VLAALEVDLS AALRFAPGLL MLTAQRLLAR DPEGGVRDWA LSPGLSLRLI EHGGVGTLEL HDATQRLALW RFTLGHHPQA LLLQQKFEQL VGYLCASGDS PRQAGPDDEA RCEACGAVLP PDADECPACA RQQAPQTSTW VLLRLWRFAH PYRHQLLLGF LLTLASTGAT LVAPYLTIPI VDRILIPFQN GQRIDAGLVG FYLGALLLSA LVAWGLGWAR TFVLARVSER IGSDLRTTTY KHLLTLSLDY YGSKRTGDLM ARIGAETDRI NLFLSLNALD FATDVLMIAM TSVILFSINP WLALVTLVPL PFIAWMIHLV RDRLRTGFEK IDRVWSEVTN VLADTIPGIR VVKAFAQEKR ESDRFAQANL VNLQANDRVN KTWSLFTPTV TLLTEVGLLI VWGFGIWLVA GGQITVGILT AFIAYIGRFY SRLDSMSRIV SVTQKAAAGA KRIFDILDHV SSVPDPVQPV ELPRVEGRLT LANVNFRYGS RSVIRNLDLQ IRPGEMIGLV GHSGSGKSTL VNLISRFYDV TEGSIQVDGV DVRRLRVADY RRHIGLVLQE PFLFFGTIAE NIAYGKPHAS REEIVAAARA AHAHEFILRL PHGYDSLVGE RGQGLSGGER QRISIARALL IDPRILILDE ATSAVDTETE KEIQKALDNL VQGRTTIAIA HRLSTLRKAD RLVVMDRGEI VEVGPHDELM EKQGAYWRLY EAQARRAEED AQASGLVVVD SALLHSSHPA GTV
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