| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3974 |
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| Symbol | |
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| ID | 4669551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4404615 |
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| End bp | 4405850 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639825163 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_972291 |
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| Protein GI | 120612613 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGT TTTCTTTCGA AGCCCTCGAT GCCCAGGGGC AGACCCGCAA AGGCACCCTC
GAAGCCGACA ACGCCAAGGC GGCGCGCAGC CTGCTGCGCG CCCAGGCGCT GGTGCCGCTG
GCCGTGGAGG CGCTCGGCAC CGGCCAGGGC GCGGGCGGAG ACGGCAGCGT CTCGCTCGGT
CAGCGGCTGT TCACGCGGCC GGTGTTCGGC GCCACGGGCC TGGCGGTGTG GACGCGCCAG
CTCGCGGGGC TCGTGTCGTC CGGGCTGCCG CTGGAGCGGG CGCTCACGGC GCTGGCCGAC
GAGTCGGACG ACGACCGGCA GCGCCACCTG GTGGCCACAT TGCGGGCCGA GGTGAATGCC
GGCTCCACCT TCGCGCGGGC GCTCACGGCG CACCCGCGGG AGTTCTCGTC CATCTATTGC
GCGGTGATCG GCGCCGGCGA ATCCAGCGGC CACCTGGGGC TGGTGCTGGA GCGCCTGGCG
GACGACCTCG AAGAGCGGCA GGCGCTCAAG GCCAAGCTCA TCGGCGCGTC CCTCTATCCG
GCGATCGTGA CGGTGATCGC GATCGTGATC GTGCTGTTCC TCGTGGGCTA CGTGGTGCCG
CAGGTGGCCG CGGTGTTCGC GGGCAGCAAG CGCGCCCTGC CTTTCCTCAC CGTGGCGATG
ATGGCCCTCT CCGACGCGGT GCGCAGCTAC GGCTGGGCGG CCCTGGTGGT GCTGGTGGTG
CTGGCGCTGG CCGCCCGCTC CGCGCTGGCC CAGCCCCGCG TGCGCGAACG CTTCGATGCC
GCCTGGCTGG GCCTGCCCGT GGTGGGCCGG CTCTCGCGCG GCTACAACGC GGCCCGTTTC
ACGGGCACGC TGTCGATGCT GGCCGGCGCG GGCGTGCCCA TCCTGAAGGC CCTGCAGGCC
GCCGCCGAGA CGCTAGGCAA CACCGCCATG CGCGCGGACG CGCTCGATGC GCTGGTGCTG
GTGCGCGAGG GCGCGCCCCT GGCCTCCGCG CTGGCGCAAA AAAAACGGTT CCCCGGCCCG
GTGTCGATGT TCGCGCGCCT GGGCGAGCAG ACGGGGCAGT TGCCGCTGAT GCTGCAGCGC
GCGGCCGCGC AGCTGTCGGC CGAGGTGCAG CGCCGCGCGA TGCAGCTGGC CACCATCCTG
GAGCCCCTGC TCATCGTGGC GATGGGCGTG ATCGTGATGC TCATCGTGCT GGCGGTGCTC
ATGCCCATCA TCCAGCTCAA CCAGTTCGTG AAGTAG
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| Protein sequence | MPAFSFEALD AQGQTRKGTL EADNAKAARS LLRAQALVPL AVEALGTGQG AGGDGSVSLG
QRLFTRPVFG ATGLAVWTRQ LAGLVSSGLP LERALTALAD ESDDDRQRHL VATLRAEVNA
GSTFARALTA HPREFSSIYC AVIGAGESSG HLGLVLERLA DDLEERQALK AKLIGASLYP
AIVTVIAIVI VLFLVGYVVP QVAAVFAGSK RALPFLTVAM MALSDAVRSY GWAALVVLVV
LALAARSALA QPRVRERFDA AWLGLPVVGR LSRGYNAARF TGTLSMLAGA GVPILKALQA
AAETLGNTAM RADALDALVL VREGAPLASA LAQKKRFPGP VSMFARLGEQ TGQLPLMLQR
AAAQLSAEVQ RRAMQLATIL EPLLIVAMGV IVMLIVLAVL MPIIQLNQFV K
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