Gene Aave_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3965 
Symbol 
ID4667705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4394845 
End bp4396389 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content71% 
IMG OID639825154 
Productprotease Do 
Protein accessionYP_972282 
Protein GI120612604 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.938465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA TCCTCTCCAC CCCCCGCCGC CTGACCCTCG CCCTGGTGGT CGCCGGGGCC 
ATGGGGGCGA CGGGCGCGGG GCTCGTCACC AACCTGCATT CCAGCCATGC CGCGGTGCCT
CCCGCGGCCA CGGGTCCGGT GGCTGCGGCG CCGGCCGCGT ATTCCGGCGT GTCCGCCCCG
GATTTCGCGC AGATCACGGC GCTCAACGGC CCGGCGGTGG TGAACATCAG CGTGACGGGC
ACGACCAAGA CCTCATACAA CGGCGGGGAT GACGACGACG ACGATGAGAC GCCCTCTGCC
CAGCACCAGC AGCCCCGCGG CGGGCAGGGC ATGGATCCGG ACGATCCGTT CTTCGAATTC
TTCCGCCGCT TCGGCATGCC CGGCATGGGC GGCGGCCGCA TGCCGCAGCG CGAGGTGCCG
ATGCGCGGCG AGGGCTCGGG TTTCATCGTG AGCCCGGACG GCGTCATACT GACCAATGCC
CATGTGGTCA AGGGCGCCAG CACGGTCACG GTGAAGCTCA CCGACCGGCG CGAATTCCGC
GCCAAGGTGC TGGGCTCCGA TCCCAAGACC GACATCGCCG TCCTGAAAAT CGACGCGAAA
GACCTGCCCG TGGTGCACCT GGGCGATACG AAAAAGCTCG CGGTGGGCGA ATGGGTGCTG
GCCATCGGCT CGCCCTTCGG TTTCGAGAAC AGCGTGACGG CGGGCGTGGT GAGCGCCAAG
GGCCGCGCGC TGCCGGACGA CAGCTTCGTG CCCTTCATCC AGACGGACGT GGCGGTGAAC
CCCGGCAACT CCGGCGGCCC GCTGTTCAAC TCGCGCGGCG AGGTGGTGGG CATCAACTCG
CAGATCTACA GCCGCTCGGG CGGCTACCAG GGCGTGTCAT TCGCGATCCC GATCGAAGTG
GCGGAGCGGG TGAAGGAGCA GATCCTGGCC ACGGGCAAGG CCAGCCATGC GCGCCTGGGC
GTGTCGGTGC AGGAGGTGAA CCAGGCGTTC GCCGATTCCT TCCAGCTCGA CAAGCCCGAG
GGCGCGCTGG TGGCGGGCGT GGAGCCCGGC GGCCCGGCGG ACAAGGCCGG CCTGAAGTCG
GGCGACGTGA TCCTGCGCAT CAACGGCCAG CCCATCGTGG CGTCCGGCGA CCTGCCGGCC
TTCGTGGGCC AGTCGGCGCC CGGCTCCACC GCGCGCATGC AGGTGTGGCG CCACGGCAAG
CAGGAAGAGA TCACCGCCAC CCTGGGCGAT GCGAGCGACA AGCCGGCCAA GCTGGCCAGC
GCCGACAAGG CGGTGGGCAA GGGCCAGCTG GGCCTGTCGC TGCGGCCGCT GCAGCCGCAG
GAGCGCCGCG AGGCCGGCGT GAGCGGCGGG CTGGTGGTGG AAGAAGCGCG CGGCCCGGCC
GCCCTGGCGG GCGTGGCCCC CGGCGATGTG CTGCTGTCCA TCAACGGCAC GCCGGCGCAG
AGCATCGAGC AGGTGCGCGC CGCGATGGCC AAGGCGGGCA AGTCGGTGGC GCTGCTGATC
CAGCGCGACG GCGACAAGAT CTTCGTGCCC GTGCCCCTGG GCTGA
 
Protein sequence
MNTILSTPRR LTLALVVAGA MGATGAGLVT NLHSSHAAVP PAATGPVAAA PAAYSGVSAP 
DFAQITALNG PAVVNISVTG TTKTSYNGGD DDDDDETPSA QHQQPRGGQG MDPDDPFFEF
FRRFGMPGMG GGRMPQREVP MRGEGSGFIV SPDGVILTNA HVVKGASTVT VKLTDRREFR
AKVLGSDPKT DIAVLKIDAK DLPVVHLGDT KKLAVGEWVL AIGSPFGFEN SVTAGVVSAK
GRALPDDSFV PFIQTDVAVN PGNSGGPLFN SRGEVVGINS QIYSRSGGYQ GVSFAIPIEV
AERVKEQILA TGKASHARLG VSVQEVNQAF ADSFQLDKPE GALVAGVEPG GPADKAGLKS
GDVILRINGQ PIVASGDLPA FVGQSAPGST ARMQVWRHGK QEEITATLGD ASDKPAKLAS
ADKAVGKGQL GLSLRPLQPQ ERREAGVSGG LVVEEARGPA ALAGVAPGDV LLSINGTPAQ
SIEQVRAAMA KAGKSVALLI QRDGDKIFVP VPLG