| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3965 |
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| Symbol | |
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| ID | 4667705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4394845 |
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| End bp | 4396389 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639825154 |
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| Product | protease Do |
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| Protein accession | YP_972282 |
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| Protein GI | 120612604 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.938465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGA TCCTCTCCAC CCCCCGCCGC CTGACCCTCG CCCTGGTGGT CGCCGGGGCC
ATGGGGGCGA CGGGCGCGGG GCTCGTCACC AACCTGCATT CCAGCCATGC CGCGGTGCCT
CCCGCGGCCA CGGGTCCGGT GGCTGCGGCG CCGGCCGCGT ATTCCGGCGT GTCCGCCCCG
GATTTCGCGC AGATCACGGC GCTCAACGGC CCGGCGGTGG TGAACATCAG CGTGACGGGC
ACGACCAAGA CCTCATACAA CGGCGGGGAT GACGACGACG ACGATGAGAC GCCCTCTGCC
CAGCACCAGC AGCCCCGCGG CGGGCAGGGC ATGGATCCGG ACGATCCGTT CTTCGAATTC
TTCCGCCGCT TCGGCATGCC CGGCATGGGC GGCGGCCGCA TGCCGCAGCG CGAGGTGCCG
ATGCGCGGCG AGGGCTCGGG TTTCATCGTG AGCCCGGACG GCGTCATACT GACCAATGCC
CATGTGGTCA AGGGCGCCAG CACGGTCACG GTGAAGCTCA CCGACCGGCG CGAATTCCGC
GCCAAGGTGC TGGGCTCCGA TCCCAAGACC GACATCGCCG TCCTGAAAAT CGACGCGAAA
GACCTGCCCG TGGTGCACCT GGGCGATACG AAAAAGCTCG CGGTGGGCGA ATGGGTGCTG
GCCATCGGCT CGCCCTTCGG TTTCGAGAAC AGCGTGACGG CGGGCGTGGT GAGCGCCAAG
GGCCGCGCGC TGCCGGACGA CAGCTTCGTG CCCTTCATCC AGACGGACGT GGCGGTGAAC
CCCGGCAACT CCGGCGGCCC GCTGTTCAAC TCGCGCGGCG AGGTGGTGGG CATCAACTCG
CAGATCTACA GCCGCTCGGG CGGCTACCAG GGCGTGTCAT TCGCGATCCC GATCGAAGTG
GCGGAGCGGG TGAAGGAGCA GATCCTGGCC ACGGGCAAGG CCAGCCATGC GCGCCTGGGC
GTGTCGGTGC AGGAGGTGAA CCAGGCGTTC GCCGATTCCT TCCAGCTCGA CAAGCCCGAG
GGCGCGCTGG TGGCGGGCGT GGAGCCCGGC GGCCCGGCGG ACAAGGCCGG CCTGAAGTCG
GGCGACGTGA TCCTGCGCAT CAACGGCCAG CCCATCGTGG CGTCCGGCGA CCTGCCGGCC
TTCGTGGGCC AGTCGGCGCC CGGCTCCACC GCGCGCATGC AGGTGTGGCG CCACGGCAAG
CAGGAAGAGA TCACCGCCAC CCTGGGCGAT GCGAGCGACA AGCCGGCCAA GCTGGCCAGC
GCCGACAAGG CGGTGGGCAA GGGCCAGCTG GGCCTGTCGC TGCGGCCGCT GCAGCCGCAG
GAGCGCCGCG AGGCCGGCGT GAGCGGCGGG CTGGTGGTGG AAGAAGCGCG CGGCCCGGCC
GCCCTGGCGG GCGTGGCCCC CGGCGATGTG CTGCTGTCCA TCAACGGCAC GCCGGCGCAG
AGCATCGAGC AGGTGCGCGC CGCGATGGCC AAGGCGGGCA AGTCGGTGGC GCTGCTGATC
CAGCGCGACG GCGACAAGAT CTTCGTGCCC GTGCCCCTGG GCTGA
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| Protein sequence | MNTILSTPRR LTLALVVAGA MGATGAGLVT NLHSSHAAVP PAATGPVAAA PAAYSGVSAP
DFAQITALNG PAVVNISVTG TTKTSYNGGD DDDDDETPSA QHQQPRGGQG MDPDDPFFEF
FRRFGMPGMG GGRMPQREVP MRGEGSGFIV SPDGVILTNA HVVKGASTVT VKLTDRREFR
AKVLGSDPKT DIAVLKIDAK DLPVVHLGDT KKLAVGEWVL AIGSPFGFEN SVTAGVVSAK
GRALPDDSFV PFIQTDVAVN PGNSGGPLFN SRGEVVGINS QIYSRSGGYQ GVSFAIPIEV
AERVKEQILA TGKASHARLG VSVQEVNQAF ADSFQLDKPE GALVAGVEPG GPADKAGLKS
GDVILRINGQ PIVASGDLPA FVGQSAPGST ARMQVWRHGK QEEITATLGD ASDKPAKLAS
ADKAVGKGQL GLSLRPLQPQ ERREAGVSGG LVVEEARGPA ALAGVAPGDV LLSINGTPAQ
SIEQVRAAMA KAGKSVALLI QRDGDKIFVP VPLG
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