Gene Aave_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3956 
Symbol 
ID4668583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4382634 
End bp4387055 
Gene Length4422 bp 
Protein Length1473 aa 
Translation table11 
GC content78% 
IMG OID639825144 
Producthypothetical protein 
Protein accessionYP_972273 
Protein GI120612595 
COG category[S] Function unknown 
COG ID[COG2911] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.743785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGC ACCAGACCCC GAACCCCTAT GCCGCCGCCG CGGCCCCGCC ACCCCGCGCA 
CCCCGGCGGC GTGCCCTGCG CATCGCGCTC TGGTCCCTCG CCAGCCTCAT CGCACTGCTG
CTCGTGCTGC TCGCCGCGGC CTGGTGGTGG ACGGGCACCG GCAACTCCCT GGCCACCGCG
CTCGCCCAGG TCGCCCGCTA CCTGCCGGCC GGGCAGACCC TGGAAACGCG CGACGTCTCC
GGCTCCGTGC GCGCGGGCGG GCAGATCGGC TGGCTGCGCT GGAGCAGCCC CACCCTCGTG
GTGGAAGTGC AGGACGCGCG CATCGGCTGG AGCCTGCCGC CGCTGCTGCA GCGCGAACTC
TCGCTGGGCG AAGTGCATGC CGCGCGCATC GTCGCCACGC CGCGCACGCC CGCGGAGCCC
GAGCCGGACA AGCCGGTGCA GCCCCTGGAA CAGCTGGTGC TGCCGCTGCG CATCGACATT
CCCCTGCGCG TGGACGAAAT CACCTGGGCC GCCGCCAGCC CCGCCACCGT GCGCAACCTC
GCCGGCCGCT ACCGCTTCGA CGGCGACCAG CACAGCGCCA CGCTCGACAA CCTGGAGCTG
GCCCGGGGCC GCTACAGCGG CAGCGCCACG CTGCAGGCAC AGGCCCCCAT GGCCCTGGAA
CTCACGGCCG ACGGCGTGGT CCGCACACCC GCTCCCGGCG GCGGCGCGGA CCTGGAAGCC
ACTGCCCGCG CCGAGGTGCG CGGCACCCTC GCCACGGCCG CCGCGCGCCT GGACGTGTCC
GGGCGCCTGC AGGCCGTGGC CGCGCAGGCC GCAGCGCCGC GGGGCCCCGC GGCGTCCGCG
CCCCGCCGCG CCGGCTCCGC GCCCCGTCCG GCCCCCGCCA CGCCCACCAC GCCGTCCGCT
TCGGTAGCTG CTTCATCCCC CGCCGGCACG ACGCCTTCCG GCACGGAGCC CATGCAGGCC
CAGGTCCAGG CCCGCGTCGC CCCCTGGGCG CCGCAGCCCC TGCTGCAGGC ACAGGCGCAG
GTGCAGGCCC TGGACGTGGC CGCGATCTGG CCCCAGGCCC CTGCCACGCG CCTGAGCGGC
CGCATCGAAG CCGCGCCCGC GCCGGCCACC GCGCCAGGAA CCGGGGCTCC GCAGGCCGTG
CCGCAGCCGG CGCCTGCCCG GGCACCGGCA TCGGCCGCTT CCGCGCCCTC CGCGTCCGCC
GGCACGCCGC CAGCGACCGG CTGGGCCCTG TCCGCCCAGC TGGAAAACGC CCTGCCCGGC
CCCTGGGACA AGGGCCGGCT GCCGGTCGAA TCCATCGACG CGCGCGCCGG TTTCGATGGC
GCACGCTGGA GCGTGCCCCA GGCCACCGCC CGCGTGGGCA GCGGCACGAT CGCGCTGGAA
GGCGCCTTCA CGCCCGCCAC GCATGCCCTG CAGGGCGACC TGGAACTGCG CGGCGTGCGG
CCCGACGCCG TGCTCAGCAC CCTGGACGCC GCGCCGCTGT CCGGCCGGGC GCGCGCGCGC
AGCGACGGCG CCCCCGCCGC CGACCACAAC GATGCCGCGC CCGTCCCGCT GGTGCGCTTC
TCGGCCGACA TCCGCTCCGC AGGCACCGGC CGCGCGCCAC GCGAGGGCGG CACGTCCACC
GCGCAGGCCG CCCCGCCGCT GCGCATCGAC CGGCTCGCCA CCGAAGGCAC CTGGCAGGGC
ACCCTGCTCA CCCTGGCGCA GCTGCAGCTG GACGCGCTGC AGGTGCAGGC CAGTGCGCGC
CAGTTGCGCA TCGACACCGC CGACCGCTCC GCCCAGGGCC AGTTGCAGGC CACGCTGCCC
GGCGCCACCG CACAGGTGGA CGGCCGCATC GCCCCGCGTG CCGGCGCGGG CACGCTGGAC
CTGCGCGTCG CGGACGCGCA GCGCGTGCAG CGCTGGATCG AATCCGTTCC CGGCCTGGGC
ACCGCCCTCG GCGGCGCGGC GCTGCAGGGC GAGGCGCGCC TCGACGCCCG CTGGAACGGC
GGCTGGGAAT CCCTGCTGGG CCAGTTGCAG ACCGCCGGAC TCGTGGCAAA GCCCCGGACC
GGCGGCGCCA CCGCCGCCGG CCCCTTCGAG CTGCAGGCCC GCCTCGCCGC CCCGCGCTGG
GAAGTGGCCC TGCCGCCGCG GCCCGGCACC GGCGCGGGCC CCGCGACGCT CAGGCTCACG
GCCGTGCGGG CCGACGTGGC CGGCTCCGTG CCGCGCGCCA CGCTTTCCCT GGACGGCGAG
GCGCGGCTCG ACGAGCGCCG GCTGGACCTG CGCCTGCGCG GCTCCGGCGG CGCCGCCGGC
CCGGACCAGT GGCGCGCGCA GATCGACGAA CTGCGCCTGC AGGCCCGCGA CGGACAGCGC
CCGGGCCCCT GGACGGTGCA GTTCGCGCAG CCGCTCACCG TGTCGGCACG CACCGCGCCC
ACGCTGCAGG TGGAAACCTC CGGCGGGCAG GCGCGCGTGT CCGCGCCCGC GCCGGGCGAT
GTCACCCTGC GCTGGGAGCC CGTGCGCTTC GCGCGCACCG CATCGGGCGG CCTCCAGCTG
CGCACGCGCG GCCAGCTGCA GGGCCTGCCC ATGGCCTGGG CCGAAGCGCT GGCGCAGGGC
AGCGACGCCC TGGACCGCCT GGGCGTGCAG GGCAACCTCG TCTTCGACGG CGACTGGGAC
GTGGACGCGG GCGACACCCT GCGCGCGTCC GCCAGCCTGC GCCGCACCTC CGGCGACCTG
CGCCTGCTGA CCGGCAACGC GCCGGCGGCC ACCGTCGTGC GCAGCAGCGG CCCGAGCGCG
GGCACCGGCA CGGGGCCGGC CGCCGGCATG GTCCGTGGAA CGGCTGCCGC CGCCAACGCC
TCCGCGACCG ACACGCCGCG CGGCGCCGGC ACCCCCGCCG GCGTGCGCGC CGCCGAAGTG
CGCGTGCAGG CGGAAGGCGA CACCGTGCGC GCGCGCCTGC AATGGGACAG CGAGCGCGCC
GGCCAGGTCC AGGCCGAGGC CTCCACGCAC CTGGCGCGCG TGGGCGAAGG GTGGGAATGG
CCCGCCGACG CGCCCCTCTC CGCCACCGCG CGCGCGCGGC TGCCCGACGT GGGCGTGTGG
TCCACGCTCG CCCCGCCGGG CTGGCGCGTG CAGGGCACGC TCGATGCCGA CGTGGTGCTG
TCCGGCACCC GCACCGCGCC GCGCTGGAGC GGCACGCTCG CCGCCGACCA GCTGGCCGTG
CGCTCGCTGC TCGACGGCGT GGACCTGCAG AACGGCCGCC TGCGCGCGGC GCTGCGCGGC
GACCGGCTCG AGATCACCGA GTTCCGCGTG AACGGCGGCC CCGGAAGCAG CGCACGCATC
GCGGGCTTCA GCGGCAACCG CACCGCCGCG CCCAAGGACG GCGGCACCCT CTCGGGCACC
GGCACCGTGT CCTGGGCCGG CATGGGCCGG GAGGCCGCAG CGGGCGGCTC GGGCATCGCC
ATGGACTTCA CCGCGGATGC GCGCGCCCTG CAGGTGCTGG TGCGCGCCGA CCGGCAGGTG
AGCGTCTCGG GCCAGGTGCG CGCGCAGCTG CGCCAAGGCC AGTTGTCGCT GCGCGGCAAG
CTCACCGCCG ACCGGGCCAC CATCATCCTC CCGGAGGCCG GCGCGCCCAG CCTGGGCAGC
GACGTGGTCG TACGCTCCGC CGCCACCGAC CGTGCCCGTG CCGAGGCCGC CCAGCGCGAA
GGCGCCCAGG CCGGCCGCGT GGAAGCCGCG CGCCCACCGG ACATCGCCCT CACCTTCGAC
CTCGGCGACG ACTTCGCGCT GCAGGGCCAC GGCGTGACCA CGCGCCTGGC CGGCGAGCTG
GACATCCGCG GCGCCACCAC GGCCGGCGGC CCGCCGCGCA TCACCGGCGA GGTCCGCACC
GTCGAGGGCC GCTACCGCGC ATGGGGGCAG GCGCTCAACA TCGAGACCGG CCTCGCGCGC
TTCAACGGCC CCTACGACAA CCCCGCGCTG GACGTGCTGG CCATCCGGCC CAACATCAGC
GTGCGCGCGG GCGTGCAGGT CTCCGGCACG GCCAAGGCGC CGCGCGTGGC GCTCTACTCC
GACCCCGAGC TGCCCGACGC CGAAAAACTC TCCTGGGTGG TCCTGGGCCG CAGCACCGCC
GCCGGCGGCG CCGAGGCCGC GCTGCTGCAG CAGGCCGCGC TGGCCCTGCT GGGCGGCGGG
GGCGGCAACG CCGGTGCGGG CAATTTCGCG AGCCGCCTGG GGCTGGACGA GATCGGCTTC
CGCGGACCGA ACTCCGGCGC CAGCGGCGAA GACGCCTCGG GCGCCGCGCT CACCTTCGGC
AAGCGGCTGT CCAAGGATCT GTACGTCACC TACGAGCGCA GCCTGTCGGG CGCCCTGGGC
ACGCTCTACA TCTTCTACGA CCTCACGCAG CGGCTCACGC TGCGCGGCCA GACGGGCGTG
CAGAGCGCGG TGGACCTGAT CTACACGCTG CGGTACGACT GA
 
Protein sequence
MATHQTPNPY AAAAAPPPRA PRRRALRIAL WSLASLIALL LVLLAAAWWW TGTGNSLATA 
LAQVARYLPA GQTLETRDVS GSVRAGGQIG WLRWSSPTLV VEVQDARIGW SLPPLLQREL
SLGEVHAARI VATPRTPAEP EPDKPVQPLE QLVLPLRIDI PLRVDEITWA AASPATVRNL
AGRYRFDGDQ HSATLDNLEL ARGRYSGSAT LQAQAPMALE LTADGVVRTP APGGGADLEA
TARAEVRGTL ATAAARLDVS GRLQAVAAQA AAPRGPAASA PRRAGSAPRP APATPTTPSA
SVAASSPAGT TPSGTEPMQA QVQARVAPWA PQPLLQAQAQ VQALDVAAIW PQAPATRLSG
RIEAAPAPAT APGTGAPQAV PQPAPARAPA SAASAPSASA GTPPATGWAL SAQLENALPG
PWDKGRLPVE SIDARAGFDG ARWSVPQATA RVGSGTIALE GAFTPATHAL QGDLELRGVR
PDAVLSTLDA APLSGRARAR SDGAPAADHN DAAPVPLVRF SADIRSAGTG RAPREGGTST
AQAAPPLRID RLATEGTWQG TLLTLAQLQL DALQVQASAR QLRIDTADRS AQGQLQATLP
GATAQVDGRI APRAGAGTLD LRVADAQRVQ RWIESVPGLG TALGGAALQG EARLDARWNG
GWESLLGQLQ TAGLVAKPRT GGATAAGPFE LQARLAAPRW EVALPPRPGT GAGPATLRLT
AVRADVAGSV PRATLSLDGE ARLDERRLDL RLRGSGGAAG PDQWRAQIDE LRLQARDGQR
PGPWTVQFAQ PLTVSARTAP TLQVETSGGQ ARVSAPAPGD VTLRWEPVRF ARTASGGLQL
RTRGQLQGLP MAWAEALAQG SDALDRLGVQ GNLVFDGDWD VDAGDTLRAS ASLRRTSGDL
RLLTGNAPAA TVVRSSGPSA GTGTGPAAGM VRGTAAAANA SATDTPRGAG TPAGVRAAEV
RVQAEGDTVR ARLQWDSERA GQVQAEASTH LARVGEGWEW PADAPLSATA RARLPDVGVW
STLAPPGWRV QGTLDADVVL SGTRTAPRWS GTLAADQLAV RSLLDGVDLQ NGRLRAALRG
DRLEITEFRV NGGPGSSARI AGFSGNRTAA PKDGGTLSGT GTVSWAGMGR EAAAGGSGIA
MDFTADARAL QVLVRADRQV SVSGQVRAQL RQGQLSLRGK LTADRATIIL PEAGAPSLGS
DVVVRSAATD RARAEAAQRE GAQAGRVEAA RPPDIALTFD LGDDFALQGH GVTTRLAGEL
DIRGATTAGG PPRITGEVRT VEGRYRAWGQ ALNIETGLAR FNGPYDNPAL DVLAIRPNIS
VRAGVQVSGT AKAPRVALYS DPELPDAEKL SWVVLGRSTA AGGAEAALLQ QAALALLGGG
GGNAGAGNFA SRLGLDEIGF RGPNSGASGE DASGAALTFG KRLSKDLYVT YERSLSGALG
TLYIFYDLTQ RLTLRGQTGV QSAVDLIYTL RYD